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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-179419 | APC:Cdc20 mediated degradation of cell cycle proteins prior to satisfation of the cell cycle checkpoint | 9/41 | 73/11146 | 3.95032142933602e-12 | 2.43603154809055e-11 | 1.36297639959547e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D044783 | F-Box Proteins | 10/42 | 240/26076 | 4.10958511946913e-12 | 2.21660747381366e-10 | 1.85742432702322e-10 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| GO | B_5_1 | GO:0005838 | proteasome regulatory particle | 6/42 | 22/19960 | 4.3507679372997e-12 | 1.19646118275742e-10 | 6.86963358521005e-11 | ADRM1/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 6 |
| reactome | B_5_1 | R-HSA-176409 | APC/C:Cdc20 mediated degradation of mitotic proteins | 9/41 | 75/11146 | 5.08406456388576e-12 | 3.07816999958902e-11 | 1.72225727810101e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-176814 | Activation of APC/C and APC/C:Cdc20 mediated degradation of mitotic proteins | 9/41 | 76/11146 | 5.75203102470067e-12 | 3.42040416290236e-11 | 1.91373964543612e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-983705 | Signaling by the B Cell Receptor (BCR) | 10/41 | 112/11146 | 6.02764600675111e-12 | 3.52141424604933e-11 | 1.97025548143111e-11 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-8852276 | The role of GTSE1 in G2/M progression after G2 checkpoint | 9/41 | 77/11146 | 6.49642372407367e-12 | 3.72984327606299e-11 | 2.0868729567351e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5619084 | ABC transporter disorders | 9/41 | 78/11146 | 7.32472130822568e-12 | 4.13412236549009e-11 | 2.31306988680811e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-9711123 | Cellular response to chemical stress | 12/41 | 211/11146 | 7.55504613293093e-12 | 4.19305060377667e-11 | 2.34604064127855e-11 | COX5B/PRDX3/PRDX6/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 12 |
| MeSH_gene2pubmed | B_5_1 | D054334 | Viral Regulatory and Accessory Proteins | 9/42 | 175/26076 | 8.27626797937026e-12 | 4.20142309776267e-10 | 3.52061678131726e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |