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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-5689603 | UCH proteinases | 10/41 | 102/11146 | 2.32725472694509e-12 | 1.65090661802701e-11 | 9.23693603258357e-12 | ADRM1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-8948751 | Regulation of PTEN stability and activity | 9/41 | 69/11146 | 2.33010843985795e-12 | 1.65090661802701e-11 | 9.23693603258357e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-9793380 | Formation of paraxial mesoderm | 9/41 | 69/11146 | 2.33010843985795e-12 | 1.65090661802701e-11 | 9.23693603258357e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-382556 | ABC-family proteins mediated transport | 10/41 | 103/11146 | 2.57093771250109e-12 | 1.78358803804763e-11 | 9.97929769983974e-12 | EIF2S1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-68949 | Orc1 removal from chromatin | 9/41 | 71/11146 | 3.04617200793283e-12 | 2.07015362988089e-11 | 1.15826518883805e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D003588 | Cytopathogenic Effect, Viral | 10/42 | 233/26076 | 3.06298827201389e-12 | 1.76223925249866e-10 | 1.4766827669288e-10 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-174184 | Cdc20:Phospho-APC/C mediated degradation of Cyclin A | 9/41 | 72/11146 | 3.47230599495709e-12 | 2.22361133907829e-11 | 1.24412583220122e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69017 | CDK-mediated phosphorylation and removal of Cdc6 | 9/41 | 72/11146 | 3.47230599495709e-12 | 2.22361133907829e-11 | 1.24412583220122e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-8939902 | Regulation of RUNX2 expression and activity | 9/41 | 72/11146 | 3.47230599495709e-12 | 2.22361133907829e-11 | 1.24412583220122e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-174178 | APC/C:Cdh1 mediated degradation of Cdc20 and other APC/C:Cdh1 targeted proteins in late mitosis/early G1 | 9/41 | 73/11146 | 3.95032142933602e-12 | 2.43603154809055e-11 | 1.36297639959547e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |