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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-69580 | p53-Dependent G1/S DNA damage checkpoint | 9/41 | 66/11146 | 1.53376555412157e-12 | 1.30959981928842e-11 | 7.32730102778726e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| KEGG | B_5_1 | hsa05014 | Amyotrophic lateral sclerosis | 14/28 | 371/8541 | 1.54167909131799e-12 | 1.77293095501569e-11 | 1.46053808651178e-11 | ADRM1/ATP5MC1/COX5B/EIF2S1/NDUFA6/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 14 |
| reactome | B_5_1 | R-HSA-1169091 | Activation of NF-kappaB in B cells | 9/41 | 67/11146 | 1.76716751061198e-12 | 1.43528483178973e-11 | 8.03051731394917e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-174154 | APC/C:Cdc20 mediated degradation of Securin | 9/41 | 67/11146 | 1.76716751061198e-12 | 1.43528483178973e-11 | 8.03051731394917e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5658442 | Regulation of RAS by GAPs | 9/41 | 68/11146 | 2.03145163448416e-12 | 1.57319394019355e-11 | 8.80212825712844e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69615 | G1/S DNA Damage Checkpoints | 9/41 | 68/11146 | 2.03145163448416e-12 | 1.57319394019355e-11 | 8.80212825712844e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D006790 | Host-Parasite Interactions | 9/42 | 150/26076 | 2.05258490328353e-12 | 1.42687713204906e-10 | 1.19566334051071e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5607764 | CLEC7A (Dectin-1) signaling | 10/41 | 101/11146 | 2.10444777241835e-12 | 1.59268433685298e-11 | 8.91117836646049e-12 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| MeSH_gene2pubmed | B_5_1 | D010453 | Peptide Synthases | 10/42 | 225/26076 | 2.16394111130471e-12 | 1.42687713204906e-10 | 1.19566334051071e-10 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| MeSH_gene2pubmed | B_5_1 | D009052 | Leukemia Virus, Murine | 9/42 | 152/26076 | 2.31474853403092e-12 | 1.42687713204906e-10 | 1.19566334051071e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |