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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-5610780 | Degradation of GLI1 by the proteasome | 9/41 | 60/11146 | 6.22193271269438e-13 | 6.27849573735524e-12 | 3.51286153156908e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5610783 | Degradation of GLI2 by the proteasome | 9/41 | 60/11146 | 6.22193271269438e-13 | 6.27849573735524e-12 | 3.51286153156908e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5610785 | GLI3 is processed to GLI3R by the proteasome | 9/41 | 60/11146 | 6.22193271269438e-13 | 6.27849573735524e-12 | 3.51286153156908e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5678895 | Defective CFTR causes cystic fibrosis | 9/41 | 61/11146 | 7.27987801330017e-13 | 7.12999817184987e-12 | 3.9892829980004e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D000916 | Antibody Diversity | 9/42 | 137/26076 | 8.99748656234178e-13 | 7.76483090330095e-11 | 6.50660344034611e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-174084 | Autodegradation of Cdh1 by Cdh1:APC/C | 9/41 | 63/11146 | 9.88396336395083e-13 | 9.40388514341607e-12 | 5.26153839223849e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D003564 | Cytidine Deaminase | 10/42 | 211/26076 | 1.14060221571669e-12 | 8.94854283785007e-11 | 7.49850451863511e-11 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-4608870 | Asymmetric localization of PCP proteins | 9/41 | 64/11146 | 1.14715083701494e-12 | 1.06111452423882e-11 | 5.93700871788436e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5358346 | Hedgehog ligand biogenesis | 9/41 | 65/11146 | 1.32806065028736e-12 | 1.19525458525863e-11 | 6.68753158181687e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69563 | p53-Dependent G1 DNA Damage Response | 9/41 | 66/11146 | 1.53376555412157e-12 | 1.30959981928842e-11 | 7.32730102778726e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |