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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-5362768 | Hh mutants are degraded by ERAD | 9/41 | 56/11146 | 3.22186155956218e-13 | 4.66469521449655e-12 | 2.6099290436728e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| KEGG | B_5_1 | hsa05017 | Spinocerebellar ataxia | 11/28 | 144/8541 | 3.57894691334419e-13 | 4.70375880039522e-12 | 3.87495004151551e-12 | ADRM1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7/VDAC3 | 11 |
| reactome | B_5_1 | R-HSA-4641258 | Degradation of DVL | 9/41 | 57/11146 | 3.81604108469721e-13 | 5.08296672481668e-12 | 2.8439548294375e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69541 | Stabilization of p53 | 9/41 | 57/11146 | 3.81604108469721e-13 | 5.08296672481668e-12 | 2.8439548294375e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D012192 | Retroviridae Infections | 9/42 | 128/26076 | 4.83737122393902e-13 | 4.63850151806597e-11 | 3.88687021151591e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-351202 | Metabolism of polyamines | 9/41 | 59/11146 | 5.30239251106173e-13 | 6.27849573735524e-12 | 3.51286153156908e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5387390 | Hh mutants abrogate ligand secretion | 9/41 | 59/11146 | 5.30239251106173e-13 | 6.27849573735524e-12 | 3.51286153156908e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5676590 | NIK-->noncanonical NF-kB signaling | 9/41 | 59/11146 | 5.30239251106173e-13 | 6.27849573735524e-12 | 3.51286153156908e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-187577 | SCF(Skp2)-mediated degradation of p27/p21 | 9/41 | 60/11146 | 6.22193271269438e-13 | 6.27849573735524e-12 | 3.51286153156908e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5607761 | Dectin-1 mediated noncanonical NF-kB signaling | 9/41 | 60/11146 | 6.22193271269438e-13 | 6.27849573735524e-12 | 3.51286153156908e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |