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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-350562 | Regulation of ornithine decarboxylase (ODC) | 9/41 | 51/11146 | 1.31071675271569e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| KEGG | B_5_1 | hsa05016 | Huntington disease | 14/28 | 311/8541 | 1.36658920598249e-13 | 2.13367079161283e-12 | 1.75771506860553e-12 | ADRM1/ATP5MC1/COX5B/NDUFA6/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7/VDAC3 | 14 |
| KEGG | B_5_1 | hsa05022 | Pathways of neurodegeneration - multiple diseases | 16/28 | 483/8541 | 1.39152442931271e-13 | 2.13367079161283e-12 | 1.75771506860553e-12 | ADRM1/ATP5MC1/CALM3/COX5B/EIF2S1/NDUFA6/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7/VDAC3 | 16 |
| reactome | B_5_1 | R-HSA-180534 | Vpu mediated degradation of CD4 | 9/41 | 52/11146 | 1.58094439983313e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-349425 | Autodegradation of the E3 ubiquitin ligase COP1 | 9/41 | 52/11146 | 1.58094439983313e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69601 | Ubiquitin Mediated Degradation of Phosphorylated Cdc25A | 9/41 | 52/11146 | 1.58094439983313e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69610 | p53-Independent DNA Damage Response | 9/41 | 52/11146 | 1.58094439983313e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69613 | p53-Independent G1/S DNA damage checkpoint | 9/41 | 52/11146 | 1.58094439983313e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-75815 | Ubiquitin-dependent degradation of Cyclin D | 9/41 | 52/11146 | 1.58094439983313e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-9762114 | GSK3B and BTRC:CUL1-mediated-degradation of NFE2L2 | 9/41 | 52/11146 | 1.58094439983313e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |