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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_5_1 | GO:0005762 | mitochondrial large ribosomal subunit | 4/42 | 56/19960 | 5.74442201249241e-06 | 4.15139739577909e-05 | 2.38357745212197e-05 | MRPL27/MRPL37/MRPL41/MRPL57 | 4 |
| GO | B_5_1 | GO:1904813 | ficolin-1-rich granule lumen | 5/42 | 124/19960 | 6.03839621204232e-06 | 4.15139739577909e-05 | 2.38357745212197e-05 | PGAM1/PSMC3/PSMD11/PSMD3/PSMD7 | 5 |
| MeSH_gene2pubmed | B_5_1 | D022021 | Tacrolimus Binding Proteins | 7/42 | 486/26076 | 1.14789149964908e-05 | 0.00027517510116587 | 0.00023058522229792 | CALM3/NUDT21/PSMA4/PSMC3/PSMD1/PSMD3/PSMD7 | 7 |
| GO | B_5_1 | GO:0005840 | ribosome | 6/42 | 245/19960 | 1.16557962179927e-05 | 7.54198578811293e-05 | 4.3303267682945e-05 | MRPL27/MRPL37/MRPL41/MRPL57/MRPS15/MRPS34 | 6 |
| hallmark | B_5_1 | HALLMARK_MYC_TARGETS_V1 | HALLMARK_MYC_TARGETS_V1 | 8/26 | 200/4384 | 1.25348855154933e-05 | 0.00012534885515493 | 0.00010555693065678 | EIF2S1/PRDX3/PSMA4/PSMD1/PSMD3/PSMD7/TXNL4A/VDAC3 | 8 |
| reactome | B_5_1 | R-HSA-68886 | M Phase | 9/41 | 417/11146 | 1.59014753825804e-05 | 3.92236392770317e-05 | 2.19458958496431e-05 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D004579 | Electron Transport | 5/42 | 228/26076 | 3.19623316402166e-05 | 0.00074549978933802 | 0.00062469763404918 | COX5B/ETFB/NDUFA6/PRDX3/VDAC3 | 5 |
| GO | B_5_1 | GO:0101002 | ficolin-1-rich granule | 5/42 | 185/19960 | 4.17359761610808e-05 | 0.00025505318765104 | 0.00014644202161782 | PGAM1/PSMC3/PSMD11/PSMD3/PSMD7 | 5 |
| KEGG | B_5_1 | hsa05169 | Epstein-Barr virus infection | 6/28 | 204/8541 | 4.18876148203885e-05 | 0.00042818450705286 | 0.00035273780901379 | ADRM1/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 6 |
| reactome | B_5_1 | R-HSA-449147 | Signaling by Interleukins | 9/41 | 473/11146 | 4.30554931135099e-05 | 0.00010542264122646 | 5.89846925781057e-05 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |