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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-180585 | Vif-mediated degradation of APOBEC3G | 10/41 | 54/11146 | 2.95421679616657e-15 | 9.83754193123467e-13 | 5.50417234654192e-13 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| KEGG | B_5_1 | hsa05010 | Alzheimer disease | 16/28 | 391/8541 | 5.06513471228927e-15 | 1.16498098382653e-13 | 9.59709734960073e-14 | ADRM1/ATP5MC1/CALM3/COX5B/EIF2S1/NDUFA6/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7/VDAC3 | 16 |
| GO | B_5_1 | GO:1905369 | endopeptidase complex | 10/42 | 98/19960 | 6.56645448856061e-15 | 3.61154996870833e-13 | 2.07361720691388e-13 | ADRM1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| MeSH_gene2pubmed | B_5_1 | D003562 | Cytidine | 10/42 | 128/26076 | 7.31586120584326e-15 | 9.01941174377533e-13 | 7.55788969686364e-13 | LAGE3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-1234176 | Oxygen-dependent proline hydroxylation of Hypoxia-inducible Factor Alpha | 10/41 | 66/11146 | 2.52629260040084e-14 | 4.0496498857264e-12 | 2.265806953607e-12 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-1236978 | Cross-presentation of soluble exogenous antigens (endosomes) | 9/41 | 49/11146 | 8.89725247754519e-14 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-1234174 | Cellular response to hypoxia | 10/41 | 75/11146 | 9.7010602932617e-14 | 4.0496498857264e-12 | 2.265806953607e-12 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-211733 | Regulation of activated PAK-2p34 by proteasome mediated degradation | 9/41 | 50/11146 | 1.08221872621681e-13 | 4.0496498857264e-12 | 2.265806953607e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| GO | B_5_1 | GO:1905368 | peptidase complex | 10/42 | 129/19960 | 1.10176396503526e-13 | 4.0398012051293e-12 | 2.31950308428477e-12 | ADRM1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| MeSH_gene2pubmed | B_5_1 | D019427 | HIV Integrase | 9/42 | 109/26076 | 1.10564086381554e-13 | 1.19271008184101e-11 | 9.99441149264834e-12 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |