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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_5_1 | GO:0098798 | mitochondrial protein-containing complex | 7/42 | 178/19960 | 8.26328087879427e-08 | 1.00995655185263e-06 | 5.79879359915387e-07 | MRPL27/MRPL37/MRPL41/MRPL57/MRPS15/MRPS34/TIMM8B | 7 |
| reactome | B_5_1 | R-HSA-983168 | Antigen processing: Ubiquitination & Proteasome degradation | 10/41 | 309/11146 | 1.21302090057067e-07 | 3.48220655077615e-07 | 1.94831850636124e-07 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-201681 | TCF dependent signaling in response to WNT | 9/41 | 232/11146 | 1.23223369354321e-07 | 3.50712666623836e-07 | 1.96226148229553e-07 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-157118 | Signaling by NOTCH | 9/41 | 235/11146 | 1.37524168180798e-07 | 3.8483653785047e-07 | 2.15318688792581e-07 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-68882 | Mitotic Anaphase | 9/41 | 235/11146 | 1.37524168180798e-07 | 3.8483653785047e-07 | 2.15318688792581e-07 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-2555396 | Mitotic Metaphase and Anaphase | 9/41 | 236/11146 | 1.4260239303198e-07 | 3.924512138814e-07 | 2.19579152385041e-07 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-8878171 | Transcriptional regulation by RUNX1 | 9/41 | 236/11146 | 1.4260239303198e-07 | 3.924512138814e-07 | 2.19579152385041e-07 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-9006925 | Intracellular signaling by second messengers | 10/41 | 315/11146 | 1.45176210083811e-07 | 3.96259655392698e-07 | 2.21710001594776e-07 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-5683057 | MAPK family signaling cascades | 10/41 | 325/11146 | 1.94249724621244e-07 | 5.25895595925807e-07 | 2.9424220160856e-07 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-195721 | Signaling by WNT | 10/41 | 331/11146 | 2.30244190947523e-07 | 6.1831706117359e-07 | 3.45952646839657e-07 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |