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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-5688426 | Deubiquitination | 11/41 | 297/11146 | 6.19970515761713e-09 | 2.00437069658884e-08 | 1.12145918538399e-08 | ADRM1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7/VDAC3 | 11 |
| reactome | B_5_1 | R-HSA-69481 | G2/M Checkpoints | 9/41 | 167/11146 | 7.12165150089993e-09 | 2.28029802865354e-08 | 1.27584242475636e-08 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D008930 | Mitochondria, Liver | 9/42 | 377/26076 | 7.34469779224508e-09 | 1.98077318584609e-07 | 1.65980506028696e-07 | ATP5MC1/CLPP/MRPL27/MRPL41/MRPL57/MRPS15/PDHA1/SLC25A11/VDAC3 | 9 |
| reactome | B_5_1 | R-HSA-162906 | HIV Infection | 10/41 | 231/11146 | 7.68614286729936e-09 | 2.43760530934351e-08 | 1.36385692983658e-08 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-5619115 | Disorders of transmembrane transporters | 9/41 | 176/11146 | 1.12846414760783e-08 | 3.54508076559818e-08 | 1.98349706183303e-08 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-109581 | Apoptosis | 9/41 | 180/11146 | 1.37349145651476e-08 | 4.27451079457396e-08 | 2.39161817809259e-08 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-8951664 | Neddylation | 10/41 | 246/11146 | 1.40444339384444e-08 | 4.33036713102037e-08 | 2.42287018236322e-08 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| MeSH_gene2pubmed | B_5_1 | D019925 | Cyclin A | 9/42 | 415/26076 | 1.68347281715775e-08 | 4.40253648850647e-07 | 3.68914138879544e-07 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69306 | DNA Replication | 9/41 | 186/11146 | 1.82839711892413e-08 | 5.58583706974068e-08 | 3.12531424480512e-08 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-2467813 | Separation of Sister Chromatids | 9/41 | 190/11146 | 2.20048932298244e-08 | 6.66148131411957e-08 | 3.72714459490806e-08 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |