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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-68867 | Assembly of the pre-replicative complex | 9/41 | 141/11146 | 1.59456754566988e-09 | 5.53115617404238e-09 | 3.09471990771456e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-453279 | Mitotic G1 phase and G1/S transition | 9/41 | 149/11146 | 2.60304232490738e-09 | 8.84503157340979e-09 | 4.94885597753606e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5358351 | Signaling by Hedgehog | 9/41 | 149/11146 | 2.60304232490738e-09 | 8.84503157340979e-09 | 4.94885597753606e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D014774 | Virulence | 9/42 | 338/26076 | 2.84284653870554e-09 | 8.17792187634293e-08 | 6.85275639330072e-08 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-446652 | Interleukin-1 family signaling | 9/41 | 153/11146 | 3.29113303473071e-09 | 1.10701747531851e-08 | 6.19383888513913e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69002 | DNA Replication Pre-Initiation | 9/41 | 158/11146 | 4.37245511778805e-09 | 1.45602755422342e-08 | 8.14657427208932e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-376176 | Signaling by ROBO receptors | 10/41 | 219/11146 | 4.59871907264491e-09 | 1.51621133781263e-08 | 8.4833066790844e-09 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-69242 | S Phase | 9/41 | 162/11146 | 5.45060752897238e-09 | 1.77946304622333e-08 | 9.95621808697741e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| hallmark | B_5_1 | HALLMARK_OXIDATIVE_PHOSPHORYLATION | HALLMARK_OXIDATIVE_PHOSPHORYLATION | 11/26 | 200/4384 | 5.74664488238692e-09 | 1.14932897647738e-07 | 9.67855980191481e-08 | ATP5MC1/COX5B/ETFB/MRPS15/NDUFA6/PDHA1/PRDX3/SLC25A11/SUCLG1/TIMM8B/VDAC3 | 11 |
| MeSH_gene2pubmed | B_5_1 | D016679 | Genome, Viral | 9/42 | 368/26076 | 5.9565583263087e-09 | 1.65822897922723e-07 | 1.38952650939697e-07 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |