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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_5_1 | D019562 | Viral Load | 9/42 | 269/26076 | 3.8333062711879e-10 | 1.27236281232121e-08 | 1.06618680498222e-08 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-9010553 | Regulation of expression of SLITs and ROBOs | 10/41 | 172/11146 | 4.37085784256776e-10 | 1.61721740175007e-09 | 9.04844255128062e-10 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-9758941 | Gastrulation | 9/41 | 125/11146 | 5.43431538245982e-10 | 1.98860112347156e-09 | 1.11263600080438e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-9755511 | KEAP1-NFE2L2 pathway | 9/41 | 126/11146 | 5.83710924949172e-10 | 2.11277976095733e-09 | 1.1821148022426e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-8939236 | RUNX1 regulates transcription of genes involved in differentiation of HSCs | 9/41 | 129/11146 | 7.20768068699628e-10 | 2.58081469760189e-09 | 1.44398356717413e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D014771 | Virion | 10/42 | 411/26076 | 7.96357392071958e-10 | 2.54539418280778e-08 | 2.13293383373659e-08 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7/SNF8 | 10 |
| reactome | B_5_1 | R-HSA-69206 | G1/S Transition | 9/41 | 131/11146 | 8.27181919671091e-10 | 2.93033594947312e-09 | 1.63954311065827e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D028361 | Mitochondrial Diseases | 8/42 | 197/26076 | 8.71647437482284e-10 | 2.6865419233829e-08 | 2.25120973515161e-08 | ETFB/MRPL27/MRPL37/MRPL41/MRPL57/MRPS15/PRDX3/SUCLG1 | 8 |
| MeSH_gene2pubmed | B_5_1 | D019926 | Cyclin B | 10/42 | 428/26076 | 1.17683123547735e-09 | 3.50208743523086e-08 | 2.93460275416674e-08 | PRDX6/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-6807070 | PTEN Regulation | 9/41 | 140/11146 | 1.4966848296405e-09 | 5.2462741923188e-09 | 2.93532648029217e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |