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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-1236974 | ER-Phagosome pathway | 9/41 | 90/11146 | 2.74954409879103e-11 | 1.25424408890056e-10 | 7.01758191039671e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69052 | Switching of origins to a post-replicative state | 9/41 | 91/11146 | 3.04339748603225e-11 | 1.36952886871451e-10 | 7.66260817962601e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-4086400 | PCP/CE pathway | 9/41 | 92/11146 | 3.3646415131779e-11 | 1.49390083185099e-10 | 8.35847786431563e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D002213 | Capsid | 9/42 | 205/26076 | 3.42642977158583e-11 | 1.28565604038199e-09 | 1.07732597394941e-09 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-2454202 | Fc epsilon receptor (FCERI) signaling | 10/41 | 134/11146 | 3.67169797280142e-11 | 1.6087834538722e-10 | 9.00125403304503e-11 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-8878159 | Transcriptional regulation by RUNX3 | 9/41 | 96/11146 | 4.96946291604347e-11 | 2.14913136499023e-10 | 1.20245377462706e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-9759194 | Nuclear events mediated by NFE2L2 | 9/41 | 97/11146 | 5.4634704052424e-11 | 2.33248159608426e-10 | 1.30503948951134e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-202424 | Downstream TCR signaling | 9/41 | 98/11146 | 6.00032371681856e-11 | 2.52925037683618e-10 | 1.41513297518572e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5621481 | C-type lectin receptors (CLRs) | 10/41 | 143/11146 | 7.02780938646972e-11 | 2.92532565711802e-10 | 1.63673981763834e-10 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| reactome | B_5_1 | R-HSA-3858494 | Beta-catenin independent WNT signaling | 10/41 | 146/11146 | 8.64166633555136e-11 | 3.50983401511553e-10 | 1.96377626260613e-10 | CALM3/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |