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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| WikiPathways | B_5_1 | WP2059 | Alzheimer 39 s disease and miRNA effects | 12/29 | 268/8836 | 1.55631853690697e-11 | 3.78704177314029e-10 | 3.05802940585229e-10 | ADRM1/CALM3/EIF2S1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD3/PSMD7/VDAC3 | 12 |
| reactome | B_5_1 | R-HSA-5632684 | Hedgehog 'on' state | 9/41 | 85/11146 | 1.6239103808124e-11 | 8.07107696732135e-11 | 4.5158230542623e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69656 | Cyclin A:Cdk2-associated events at S phase entry | 9/41 | 85/11146 | 1.6239103808124e-11 | 8.07107696732135e-11 | 4.5158230542623e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D017393 | RNA Editing | 9/42 | 190/26076 | 1.73419786798339e-11 | 7.12672742890319e-10 | 5.97189942508567e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-174143 | APC/C-mediated degradation of cell cycle proteins | 9/41 | 87/11146 | 2.01249997980572e-11 | 9.71249990254066e-11 | 5.43421047178662e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-453276 | Regulation of mitotic cell cycle | 9/41 | 87/11146 | 2.01249997980572e-11 | 9.71249990254066e-11 | 5.43421047178662e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D019065 | Virus Assembly | 9/42 | 194/26076 | 2.09069869599058e-11 | 8.20124079381759e-10 | 6.87229667055277e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-450531 | Regulation of mRNA stability by proteins that bind AU-rich elements | 9/41 | 88/11146 | 2.23595005522502e-11 | 1.06367338341419e-10 | 5.95132571089967e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-5687128 | MAPK6/MAPK4 signaling | 9/41 | 89/11146 | 2.48103384838207e-11 | 1.1636398190299e-10 | 6.51064479115829e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-162909 | Host Interactions of HIV factors | 10/41 | 130/11146 | 2.71001532685293e-11 | 1.25338208866948e-10 | 7.01275895983872e-11 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |