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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_5_1 | R-HSA-176408 | Regulation of APC/C activators between G1/S and early anaphase | 9/41 | 80/11146 | 9.26603868285031e-12 | 5.05834570719533e-11 | 2.83017920080156e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D044843 | SKP Cullin F-Box Protein Ligases | 10/42 | 261/26076 | 9.43118073875419e-12 | 4.52172720974715e-10 | 3.7890182266223e-10 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| GO | B_5_1 | GO:0022624 | proteasome accessory complex | 6/42 | 25/19960 | 1.02790559102046e-11 | 2.26139230024501e-10 | 1.29840706234163e-10 | ADRM1/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 6 |
| reactome | B_5_1 | R-HSA-2871837 | FCERI mediated NF-kB activation | 9/41 | 82/11146 | 1.16487598218698e-11 | 6.15720162013119e-11 | 3.44499663904922e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-9013694 | Signaling by NOTCH4 | 9/41 | 82/11146 | 1.16487598218698e-11 | 6.15720162013119e-11 | 3.44499663904922e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D044844 | beta-Transducin Repeat-Containing Proteins | 9/42 | 183/26076 | 1.23768280618873e-11 | 5.62168558810985e-10 | 4.71073732881804e-10 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| WikiPathways | B_5_1 | WP5124 | Alzheimer 39 s disease | 12/29 | 263/8836 | 1.24685323846533e-11 | 3.78704177314029e-10 | 3.05802940585229e-10 | ADRM1/CALM3/EIF2S1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD3/PSMD7/VDAC3 | 12 |
| reactome | B_5_1 | R-HSA-195253 | Degradation of beta-catenin by the destruction complex | 9/41 | 83/11146 | 1.3031577906054e-11 | 6.67617760417845e-11 | 3.73536727023735e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| reactome | B_5_1 | R-HSA-69202 | Cyclin E associated events during G1/S transition | 9/41 | 83/11146 | 1.3031577906054e-11 | 6.67617760417845e-11 | 3.73536727023735e-11 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D043743 | Ubiquitin-Protein Ligase Complexes | 10/42 | 270/26076 | 1.3181427000616e-11 | 5.68778575076582e-10 | 4.76612649969643e-10 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |