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Selected Module: B_5_1
Module Info
| Module_Name | B_5_1 |
| Cell_Type | B |
| Name | B_5_1: Parkinson disease |
| Meta_Module | B_3 |
| Gene_Number | 42 |
Genes:
ADRM1, AHCY, ATG3, ATP5MC1, CALM3, CLPP, COX5B, EIF2S1, ELOC, ETFB, GTF3C6, LAGE3, MRPL27, MRPL37, MRPL41, MRPL57, MRPS15, MRPS34, MTCH2, NDUFA6, NUDT21, PDHA1, PGAM1, PRDX3, PRDX6, PSMA3, PSMA4, PSMB4, PSMB6, PSMC3, PSMD1, PSMD11, PSMD3, PSMD7, SLC25A11, SNF8, SUCLG1, TIMM8B, TMEM126A, TRAPPC2L, TXNL4A, VDAC3
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| TGASTMAGC | 0.0393301650202121 | PSMA3/PSMD1/PSMD11/PSMD7 |
| TGACCTTG | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| SF1 | 0.0393301650202121 | ATP5MC1/COX5B/MTCH2/TIMM8B |
| ZMYM2 | 0.0468821792425049 | ADRM1/AHCY/CALM3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| KEGG | B_5_1 | hsa05012 | Parkinson disease | 16/28 | 271/8541 | 1.47145361046479e-17 | 1.3537373216276e-15 | 1.11520694687858e-15 | ADRM1/ATP5MC1/CALM3/COX5B/EIF2S1/NDUFA6/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7/VDAC3 | 16 |
| MeSH_gene2pubmed | B_5_1 | D009700 | Nucleoside Deaminases | 11/42 | 119/26076 | 4.23292656648384e-17 | 2.9990130630561e-14 | 2.51304747736725e-14 | AHCY/ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 11 |
| MeSH_gene2pubmed | B_5_1 | D016341 | Genes, vif | 9/42 | 50/26076 | 6.95020408587741e-17 | 2.9990130630561e-14 | 2.51304747736725e-14 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| GO | B_5_1 | GO:0000502 | proteasome complex | 10/42 | 64/19960 | 7.46385645214625e-17 | 8.21024209736088e-15 | 4.71401460135553e-15 | ADRM1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| KEGG | B_5_1 | hsa03050 | Proteasome | 10/28 | 46/8541 | 8.81468622560932e-17 | 4.05475566378028e-15 | 3.34030214865195e-15 | ADRM1/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| MeSH_gene2pubmed | B_5_1 | D054320 | vif Gene Products, Human Immunodeficiency Virus | 10/42 | 88/26076 | 1.52233787967801e-16 | 4.15341570193418e-14 | 3.48038859209463e-14 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| MeSH_gene2pubmed | B_5_1 | D016346 | Gene Products, vif | 10/42 | 90/26076 | 1.92510577146428e-16 | 4.15341570193418e-14 | 3.48038859209463e-14 | ELOC/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 10 |
| KEGG | B_5_1 | hsa05020 | Prion disease | 15/28 | 278/8541 | 8.59237411119221e-16 | 2.63499472743228e-14 | 2.17070503861698e-14 | ADRM1/ATP5MC1/COX5B/EIF2S1/NDUFA6/PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7/VDAC3 | 15 |
| MeSH_gene2pubmed | B_5_1 | D012357 | RNA, Transfer, Lys | 9/42 | 66/26076 | 1.00821131351928e-15 | 1.74017272713427e-13 | 1.45819194186893e-13 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |
| MeSH_gene2pubmed | B_5_1 | D003641 | Deamination | 9/42 | 71/26076 | 2.01701464573244e-15 | 2.90113939877849e-13 | 2.43103344143541e-13 | PSMA3/PSMA4/PSMB4/PSMB6/PSMC3/PSMD1/PSMD11/PSMD3/PSMD7 | 9 |