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Selected Module: B_4_1
Module Info
| Module_Name | B_4_1 |
| Cell_Type | B |
| Name | B_4_1: oxidative phosphorylation |
| Meta_Module | B_3 |
| Gene_Number | 40 |
Genes:
ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRPK1 | 0.00319087597481954 | ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1 |
| TGACCTTG | 0.032145093571554 | ATP5F1C/ATP5MC3/ATP5PF/UQCRC1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_4_1 | D019415 | Torque | 5/39 | 39/26076 | 3.1810088645563e-09 | 1.13668050093478e-06 | 9.5876723321188e-07 | ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF | 5 |
| GO | B_4_1 | GO:0009259 | ribonucleotide metabolic process | 10/40 | 368/18986 | 3.34783290980258e-09 | 7.14523195320721e-08 | 5.46728803014375e-08 | ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 10 |
| KEGG | B_4_1 | hsa04932 | Non-alcoholic fatty liver disease | 9/32 | 157/8541 | 3.72185514382604e-09 | 1.3534018704822e-08 | 8.54780128725598e-09 | COX6C/COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH | 9 |
| reactome | B_4_1 | R-HSA-163210 | Formation of ATP by chemiosmotic coupling | 5/36 | 20/11146 | 3.94119226513042e-09 | 3.41569996311303e-07 | 1.96368176017024e-07 | ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF | 5 |
| GO | B_4_1 | GO:0019693 | ribose phosphate metabolic process | 10/40 | 376/18986 | 4.11387703111136e-09 | 8.53629483955607e-08 | 6.53168195290488e-08 | ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 10 |
| MeSH_gene2pubmed | B_4_1 | D042967 | Electron Transport Complex I | 7/39 | 163/26076 | 4.25937311102216e-09 | 1.14151199375394e-06 | 9.62842500623168e-07 | NDUFA2/NDUFB6/NDUFC1/NDUFS5/PARK7/UQCRC1/UQCRH | 7 |
| MeSH_gene2pubmed | B_4_1 | D016660 | NAD(P)H Dehydrogenase (Quinone) | 7/39 | 195/26076 | 1.47471936884577e-08 | 3.16179832680534e-06 | 2.66691355334425e-06 | MDH2/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7 | 7 |
| GO | B_4_1 | GO:0008137 | NADH dehydrogenase (ubiquinone) activity | 5/40 | 41/18737 | 2.42378016190851e-08 | 4.556706704388e-07 | 3.06161704662128e-07 | NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 5 |
| GO | B_4_1 | GO:0030964 | NADH dehydrogenase complex | 5/40 | 45/19960 | 2.8734450016382e-08 | 3.92704150223888e-07 | 2.11727526436499e-07 | NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 5 |
| GO | B_4_1 | GO:0045271 | respiratory chain complex I | 5/40 | 45/19960 | 2.8734450016382e-08 | 3.92704150223888e-07 | 2.11727526436499e-07 | NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 5 |