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Selected Module: B_4_1


Module Info

Module_Name B_4_1
Cell_Type B
Name B_4_1: oxidative phosphorylation
Meta_Module B_3
Gene_Number 40

Genes:

ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1


UMAP Visualizations


UMAP for B_4_1

UMAP for B_4_1


Word Cloud

Enriched TF

Wordcloud for B_4_1
TF p.adjust Genes
SRPK1 0.00319087597481954 ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1
TGACCTTG 0.032145093571554 ATP5F1C/ATP5MC3/ATP5PF/UQCRC1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_4_1 GO:0009141 nucleoside triphosphate metabolic process 10/40 274/18986 1.92561903182443e-10 4.96012902335465e-09 3.79532172152691e-09 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 10
GO B_4_1 GO:0009117 nucleotide metabolic process 12/40 500/18986 2.78974846225743e-10 6.94647367102101e-09 5.31520496493258e-09 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/MDH2/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7 12
GO B_4_1 GO:0045259 proton-transporting ATP synthase complex 5/40 21/19960 4.95685833348084e-10 1.08432088132554e-08 5.8461459583662e-09 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF 5
GO B_4_1 GO:1990204 oxidoreductase complex 8/40 150/19960 5.28937015280751e-10 1.08432088132554e-08 5.8461459583662e-09 COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH 8
GO B_4_1 GO:1901293 nucleoside phosphate biosynthetic process 10/40 321/18986 8.9768791918511e-10 2.16313830848799e-08 1.65515972875217e-08 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 10
GO B_4_1 GO:0006120 mitochondrial electron transport, NADH to ubiquinone 6/40 51/18986 9.92392585871127e-10 2.31661644264291e-08 1.77259596752639e-08 NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7 6
GO B_4_1 GO:0006163 purine nucleotide metabolic process 11/40 440/18986 1.15431001743168e-09 2.61293813036807e-08 1.99933122636491e-08 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/MDH2/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 11
WikiPathways B_4_1 WP4396 Nonalcoholic fatty liver disease 9/31 154/8836 1.7059669257645e-09 2.78641264541534e-08 2.21476407906268e-08 COX6C/COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH 9
GO B_4_1 GO:0015399 primary active transmembrane transporter activity 8/40 166/18737 1.93621868798517e-09 4.55011391676515e-08 3.05718740208185e-08 COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH 8
GO B_4_1 GO:0009150 purine ribonucleotide metabolic process 10/40 348/18986 1.95713235186061e-09 4.29993490247021e-08 3.29016367510932e-08 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 10