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Selected Module: B_4_1


Module Info

Module_Name B_4_1
Cell_Type B
Name B_4_1: oxidative phosphorylation
Meta_Module B_3
Gene_Number 40

Genes:

ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1


UMAP Visualizations


UMAP for B_4_1

UMAP for B_4_1


Word Cloud

Enriched TF

Wordcloud for B_4_1
TF p.adjust Genes
SRPK1 0.00319087597481954 ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1
TGACCTTG 0.032145093571554 ATP5F1C/ATP5MC3/ATP5PF/UQCRC1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
hallmark B_4_1 HALLMARK_OXIDATIVE_PHOSPHORYLATION HALLMARK_OXIDATIVE_PHOSPHORYLATION 14/21 200/4384 9.49101728941015e-15 1.23383224762332e-13 1.09895989666854e-13 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/COX17/COX6C/COX8A/MDH2/NDUFA2/NDUFB6/NDUFC1/UQCRC1/UQCRH 14
GO B_4_1 GO:0042776 proton motive force-driven mitochondrial ATP synthesis 9/40 68/18986 1.40114016219898e-14 7.47608357973312e-13 5.72044442160936e-13 ATP5F1C/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 9
GO B_4_1 GO:0009206 purine ribonucleoside triphosphate biosynthetic process 10/40 111/18986 2.2575143097438e-14 1.12424212625241e-12 8.60231768555004e-13 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 10
GO B_4_1 GO:0009145 purine nucleoside triphosphate biosynthetic process 10/40 112/18986 2.47526355221326e-14 1.15563867093957e-12 8.84255334770921e-13 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 10
GO B_4_1 GO:0009201 ribonucleoside triphosphate biosynthetic process 10/40 116/18986 3.54721043655264e-14 1.55868599770872e-12 1.19265341612884e-12 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 10
GO B_4_1 GO:0009142 nucleoside triphosphate biosynthetic process 10/40 124/18986 7.01434543804383e-14 2.91095335678819e-12 2.22736232330865e-12 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 10
WikiPathways B_4_1 WP623 Oxidative phosphorylation 9/31 60/8836 2.94884515569208e-13 7.22467063144559e-12 5.74248793476878e-12 ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 9
KEGG B_4_1 hsa05020 Prion disease 14/32 278/8541 3.01903400491324e-13 3.01903400491324e-12 1.90675831889257e-12 ATP5F1C/ATP5MC3/ATP5PF/COX6C/COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PSMB1/PSMB2/UQCRC1/UQCRH 14
GO B_4_1 GO:0009152 purine ribonucleotide biosynthetic process 10/40 156/18986 7.19162231095661e-13 2.82744308751821e-11 2.16346311071991e-11 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 10
GO B_4_1 GO:0015453 oxidoreduction-driven active transmembrane transporter activity 8/40 68/18737 1.3792588902195e-12 6.48251678403164e-11 4.35555439016684e-11 COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH 8