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Selected Module: B_4_1


Module Info

Module_Name B_4_1
Cell_Type B
Name B_4_1: oxidative phosphorylation
Meta_Module B_3
Gene_Number 40

Genes:

ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1


UMAP Visualizations


UMAP for B_4_1

UMAP for B_4_1


Word Cloud

Enriched TF

Wordcloud for B_4_1
TF p.adjust Genes
SRPK1 0.00319087597481954 ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1
TGACCTTG 0.032145093571554 ATP5F1C/ATP5MC3/ATP5PF/UQCRC1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_4_1 D020774 Pick Disease of the Brain 2/39 43/26076 0.00189342485830075 0.0483274154309144 0.0407632068491315 PARK7/PRDX1 2
KEGG B_4_1 hsa04980 Cobalamin transport and metabolism 2/32 18/8541 0.00200432200916691 0.00572663431190544 0.00361682167067712 MMADHC/PRDX1 2
GO B_4_1 GO:0090317 negative regulation of intracellular protein transport 2/40 32/18986 0.00206251224236454 0.0252573220499395 0.0193260422364788 PARK7/TXN 2
reactome B_4_1 R-HSA-176408 Regulation of APC/C activators between G1/S and early anaphase 3/36 80/11146 0.00214356304137208 0.0184037919415529 0.010580317634415 ANAPC11/PSMB1/PSMB2 3
reactome B_4_1 R-HSA-9010553 Regulation of expression of SLITs and ROBOs 4/36 172/11146 0.00219429826995438 0.0184037919415529 0.010580317634415 ELOB/PSMB1/PSMB2/RPL26L1 4
GO B_4_1 GO:1990748 cellular detoxification 3/40 125/18986 0.00230420492384221 0.0277619528727441 0.0212425004014656 PARK7/PRDX1/TXN 3
reactome B_4_1 R-HSA-1852241 Organelle biogenesis and maintenance 5/36 298/11146 0.0025229580612624 0.020499034247757 0.011784869891423 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF 5
GO B_4_1 GO:0046825 regulation of protein export from nucleus 2/40 36/18986 0.00260582399084213 0.0308976273199853 0.0236418116462369 PARK7/TXN 2
reactome B_4_1 R-HSA-174143 APC/C-mediated degradation of cell cycle proteins 3/36 87/11146 0.00272298568398497 0.0208228317010615 0.0119710206540516 ANAPC11/PSMB1/PSMB2 3
reactome B_4_1 R-HSA-453276 Regulation of mitotic cell cycle 3/36 87/11146 0.00272298568398497 0.0208228317010615 0.0119710206540516 ANAPC11/PSMB1/PSMB2 3