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Selected Module: B_4_1
Module Info
| Module_Name | B_4_1 |
| Cell_Type | B |
| Name | B_4_1: oxidative phosphorylation |
| Meta_Module | B_3 |
| Gene_Number | 40 |
Genes:
ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRPK1 | 0.00319087597481954 | ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1 |
| TGACCTTG | 0.032145093571554 | ATP5F1C/ATP5MC3/ATP5PF/UQCRC1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_4_1 | D008931 | Mitochondria, Muscle | 3/39 | 142/26076 | 0.00125166020991426 | 0.0353099932902129 | 0.0297832720309239 | MDH2/NDUFB6/TUFM | 3 |
| GO | B_4_1 | GO:0071450 | cellular response to oxygen radical | 2/40 | 25/18986 | 0.00125916338324305 | 0.0165016674961852 | 0.0126265137045425 | PARK7/PRDX1 | 2 |
| GO | B_4_1 | GO:0071451 | cellular response to superoxide | 2/40 | 25/18986 | 0.00125916338324305 | 0.0165016674961852 | 0.0126265137045425 | PARK7/PRDX1 | 2 |
| reactome | B_4_1 | R-HSA-174154 | APC/C:Cdc20 mediated degradation of Securin | 3/36 | 67/11146 | 0.0012862923962731 | 0.0159255249062384 | 0.00915556492585363 | ANAPC11/PSMB1/PSMB2 | 3 |
| WikiPathways | B_4_1 | WP4921 | Mitochondrial complex III assembly | 2/31 | 16/8836 | 0.00138642827051567 | 0.0113224975425446 | 0.00899962210685611 | UQCRC1/UQCRH | 2 |
| GO | B_4_1 | GO:0005732 | sno(s)RNA-containing ribonucleoprotein complex | 2/40 | 28/19960 | 0.00143217791146178 | 0.00469754354959464 | 0.00253269356974294 | NOP10/POP7 | 2 |
| MeSH_gene2pubmed | B_4_1 | D002756 | Cholagogues and Choleretics | 2/39 | 38/26076 | 0.00148102992630381 | 0.040014168587292 | 0.0337511496626904 | MIF/PARK7 | 2 |
| MeSH_gene2pubmed | B_4_1 | D051267 | NF-E2-Related Factor 2 | 3/39 | 151/26076 | 0.00149306599206314 | 0.040014168587292 | 0.0337511496626904 | PARK7/PRDX1/TXN | 3 |
| GO | B_4_1 | GO:0000303 | response to superoxide | 2/40 | 28/18986 | 0.00158022232157242 | 0.0203521736933552 | 0.0155727898478008 | PARK7/PRDX1 | 2 |
| reactome | B_4_1 | R-HSA-174184 | Cdc20:Phospho-APC/C mediated degradation of Cyclin A | 3/36 | 72/11146 | 0.00158377574790665 | 0.0165407524501215 | 0.0095092584935921 | ANAPC11/PSMB1/PSMB2 | 3 |