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Selected Module: B_4_1
Module Info
| Module_Name | B_4_1 |
| Cell_Type | B |
| Name | B_4_1: oxidative phosphorylation |
| Meta_Module | B_3 |
| Gene_Number | 40 |
Genes:
ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRPK1 | 0.00319087597481954 | ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1 |
| TGACCTTG | 0.032145093571554 | ATP5F1C/ATP5MC3/ATP5PF/UQCRC1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_4_1 | D011522 | Protons | 5/39 | 408/26076 | 0.00034000923117825 | 0.0121496631941029 | 0.0102479975291972 | ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF | 5 |
| GO | B_4_1 | GO:0006122 | mitochondrial electron transport, ubiquinol to cytochrome c | 2/40 | 14/18986 | 0.00038758556544818 | 0.00616013654020838 | 0.00471352658540569 | UQCRC1/UQCRH | 2 |
| GO | B_4_1 | GO:0010155 | regulation of proton transport | 2/40 | 14/18986 | 0.00038758556544818 | 0.00616013654020838 | 0.00471352658540569 | COX17/PARK7 | 2 |
| GO | B_4_1 | GO:0016530 | metallochaperone activity | 2/40 | 14/18737 | 0.00039787102655283 | 0.00311665637466386 | 0.0020940580344886 | COX17/PARK7 | 2 |
| GO | B_4_1 | GO:0016874 | ligase activity | 4/40 | 167/18737 | 0.00043317479917237 | 0.00313218700940026 | 0.00210449295144474 | ATP5F1C/ATP5ME/ATP5MF/ATP5PF | 4 |
| GO | B_4_1 | GO:0098798 | mitochondrial protein-containing complex | 4/40 | 178/19960 | 0.00043489611890178 | 0.00162097644317939 | 0.00087395392315191 | AURKAIP1/MRPS16/MRPS33/MRPS7 | 4 |
| reactome | B_4_1 | R-HSA-9864848 | Complex IV assembly | 3/36 | 48/11146 | 0.00048436594516025 | 0.00787094660885407 | 0.00452499764557602 | COX17/COX6C/COX8A | 3 |
| GO | B_4_1 | GO:0042254 | ribosome biogenesis | 5/40 | 317/18986 | 0.0005122500921248 | 0.00797189205869227 | 0.00609982017595984 | MRPS7/NOP10/POP7/RPL26L1/RPS19BP1 | 5 |
| GO | B_4_1 | GO:0003735 | structural constituent of ribosome | 4/40 | 175/18737 | 0.00051682921457688 | 0.00347013901215907 | 0.00233156036651225 | MRPS16/MRPS33/MRPS7/RPL26L1 | 4 |
| MeSH_gene2pubmed | B_4_1 | D009245 | NADH Dehydrogenase | 3/39 | 113/26076 | 0.00064633069292391 | 0.0223010090587923 | 0.0188104544201714 | NDUFA2/NDUFB6/NDUFS5 | 3 |