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Selected Module: B_4_1


Module Info

Module_Name B_4_1
Cell_Type B
Name B_4_1: oxidative phosphorylation
Meta_Module B_3
Gene_Number 40

Genes:

ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1


UMAP Visualizations


UMAP for B_4_1

UMAP for B_4_1


Word Cloud

Enriched TF

Wordcloud for B_4_1
TF p.adjust Genes
SRPK1 0.00319087597481954 ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1
TGACCTTG 0.032145093571554 ATP5F1C/ATP5MC3/ATP5PF/UQCRC1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_4_1 D028361 Mitochondrial Diseases 4/39 197/26076 0.00021129545027002 0.00906034890757855 0.00764222281187154 MRPS16/MRPS7/PARK7/TUFM 4
GO B_4_1 GO:0019774 proteasome core complex, beta-subunit complex 2/40 11/19960 0.00021292460922301 0.00087299089781436 0.00047067545196666 PSMB1/PSMB2 2
WikiPathways B_4_1 WP4922 Mitochondrial complex IV assembly 3/31 34/8836 0.00021739043246537 0.00213042623816062 0.00169335705288814 COX17/COX6C/COX8A 3
GO B_4_1 GO:0045275 respiratory chain complex III 2/40 12/19960 0.00025518555944634 0.00099643885117144 0.00053723275672914 UQCRC1/UQCRH 2
reactome B_4_1 R-HSA-9759194 Nuclear events mediated by NFE2L2 4/36 97/11146 0.00025644758605261 0.00444509149157865 0.00255547769961202 PRDX1/PSMB1/PSMB2/TXN 4
MeSH_gene2pubmed B_4_1 D003575 Cytochromes c1 2/39 16/26076 0.00025811476378461 0.0106422702606581 0.00897654178506018 UQCRC1/UQCRH 2
KEGG B_4_1 hsa04260 Cardiac muscle contraction 4/32 87/8541 0.0002905076350978 0.00089386964645479 0.0005645492503925 COX6C/COX8A/UQCRC1/UQCRH 4
MeSH_gene2pubmed B_4_1 D054320 vif Gene Products, Human Immunodeficiency Virus 3/39 88/26076 0.00031084340478995 0.0121496631941029 0.0102479975291972 ELOB/PSMB1/PSMB2 3
MeSH_gene2pubmed B_4_1 D013438 Sulfhydryl Compounds 5/39 404/26076 0.00032499693239175 0.0121496631941029 0.0102479975291972 ANAPC11/MIF/PPA1/PRDX1/TXN 5
MeSH_gene2pubmed B_4_1 D016346 Gene Products, vif 3/39 90/26076 0.00033209288569885 0.0121496631941029 0.0102479975291972 ELOB/PSMB1/PSMB2 3