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Selected Module: B_4_1
Module Info
| Module_Name | B_4_1 |
| Cell_Type | B |
| Name | B_4_1: oxidative phosphorylation |
| Meta_Module | B_3 |
| Gene_Number | 40 |
Genes:
ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SRPK1 | 0.00319087597481954 | ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1 |
| TGACCTTG | 0.032145093571554 | ATP5F1C/ATP5MC3/ATP5PF/UQCRC1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_4_1 | D007888 | Leigh Disease | 4/39 | 47/26076 | 7.27339546905749e-07 | 7.08825449348148e-05 | 5.97880067743577e-05 | ATP5PF/COX17/NDUFA2/NDUFB6 | 4 |
| GO | B_4_1 | GO:0005758 | mitochondrial intermembrane space | 5/40 | 87/19960 | 8.17239166872717e-07 | 6.09214651668753e-06 | 3.28459760848365e-06 | CHCHD2/COX17/COX6C/NDUFS5/PARK7 | 5 |
| GO | B_4_1 | GO:0016651 | oxidoreductase activity, acting on NAD(P)H | 5/40 | 88/18737 | 1.17757873025311e-06 | 1.10692400643792e-05 | 7.43733934896699e-06 | NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 5 |
| WikiPathways | B_4_1 | WP4324 | Mitochondrial complex I assembly model OXPHOS system | 5/31 | 56/8836 | 1.27706808171612e-06 | 1.56440840010225e-05 | 1.24346102693412e-05 | NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 5 |
| MeSH_gene2pubmed | B_4_1 | D008930 | Mitochondria, Liver | 7/39 | 377/26076 | 1.28971132322112e-06 | 0.00011521421154108 | 9.71808795304337e-05 | ATP5F1C/ATP5MC3/COX8A/MDH2/MRPS16/MRPS7/TUFM | 7 |
| GO | B_4_1 | GO:0031970 | organelle envelope lumen | 5/40 | 98/19960 | 1.47804560502961e-06 | 1.00999783010357e-05 | 5.4454311764249e-06 | CHCHD2/COX17/COX6C/NDUFS5/PARK7 | 5 |
| reactome | B_4_1 | R-HSA-6799198 | Complex I biogenesis | 5/36 | 68/11146 | 2.37034998729998e-06 | 0.00010271516611633 | 5.9050824245017e-05 | NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 5 |
| MeSH_gene2pubmed | B_4_1 | D003576 | Electron Transport Complex IV | 6/39 | 262/26076 | 2.40040600338424e-06 | 0.00019794117197137 | 0.00016695941351474 | ATP5MF/COX17/COX6C/COX8A/TUFM/UQCRC1 | 6 |
| MeSH_gene2pubmed | B_4_1 | D011828 | Radiation Chimera | 5/39 | 147/26076 | 2.62345550946802e-06 | 0.00020088173615355 | 0.00016943972049872 | NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5 | 5 |
| GO | B_4_1 | GO:0022804 | active transmembrane transporter activity | 8/40 | 458/18737 | 4.63775931701447e-06 | 3.96317614363055e-05 | 2.66282831598917e-05 | COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH | 8 |