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Selected Module: B_4_1


Module Info

Module_Name B_4_1
Cell_Type B
Name B_4_1: oxidative phosphorylation
Meta_Module B_3
Gene_Number 40

Genes:

ANAPC11, ATP5F1C, ATP5MC3, ATP5ME, ATP5MF, ATP5PF, AURKAIP1, BOLA3, CHCHD2, COPS9, COX17, COX6C, COX8A, ELOB, MDH2, MIF, MMADHC, MRPS16, MRPS33, MRPS7, NDUFA2, NDUFB10, NDUFB6, NDUFC1, NDUFS5, NOP10, PARK7, POLDIP2, POP7, PPA1, PRDX1, PSMB1, PSMB2, RPL26L1, RPS19BP1, TUFM, TXN, UQCRC1, UQCRH, ZNHIT1


UMAP Visualizations


UMAP for B_4_1

UMAP for B_4_1


Word Cloud

Enriched TF

Wordcloud for B_4_1
TF p.adjust Genes
SRPK1 0.00319087597481954 ATP5F1C/AURKAIP1/MDH2/MRPS7/POP7/PRDX1
TGACCTTG 0.032145093571554 ATP5F1C/ATP5MC3/ATP5PF/UQCRC1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_4_1 GO:0006119 oxidative phosphorylation 15/40 149/18986 4.36064923766951e-22 2.35348076336946e-19 1.80080328966338e-19 ATP5F1C/ATP5ME/ATP5MF/ATP5PF/CHCHD2/COX6C/COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7/UQCRC1/UQCRH 15
GO B_4_1 GO:0009060 aerobic respiration 16/40 200/18986 6.30115331558088e-22 2.35348076336946e-19 1.80080328966338e-19 ATP5F1C/ATP5ME/ATP5MF/ATP5PF/CHCHD2/COX6C/COX8A/MDH2/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7/UQCRC1/UQCRH 16
WikiPathways B_4_1 WP111 Electron transport chain OXPHOS system in mitochondria 15/31 105/8836 1.21467281080512e-21 5.9518967729451e-20 4.73083094734626e-20 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/COX17/COX6C/COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH 15
KEGG B_4_1 hsa00190 Oxidative phosphorylation 16/32 138/8541 4.28601141508507e-21 1.71440456603403e-19 1.08278183117938e-19 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/COX17/COX6C/COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PPA1/UQCRC1/UQCRH 16
GO B_4_1 GO:0098803 respiratory chain complex 13/40 110/19960 2.2114782818925e-20 1.81341219115185e-18 9.77706187784053e-19 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH 13
GO B_4_1 GO:0045333 cellular respiration 16/40 249/18986 2.24043540195275e-20 5.19135602391345e-18 3.97224874372579e-18 ATP5F1C/ATP5ME/ATP5MF/ATP5PF/CHCHD2/COX6C/COX8A/MDH2/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7/UQCRC1/UQCRH 16
GO B_4_1 GO:1902600 proton transmembrane transport 15/40 195/18986 2.77984258308619e-20 5.19135602391345e-18 3.97224874372579e-18 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/COX17/COX8A/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7/UQCRC1/UQCRH 15
GO B_4_1 GO:0015980 energy derivation by oxidation of organic compounds 16/40 356/18986 6.97371963684499e-18 1.04187371374464e-15 7.9720626585407e-16 ATP5F1C/ATP5ME/ATP5MF/ATP5PF/CHCHD2/COX6C/COX8A/MDH2/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7/UQCRC1/UQCRH 16
GO B_4_1 GO:0022904 respiratory electron transport chain 12/40 125/18986 1.84784632705674e-17 2.30056867718564e-15 1.76031676419616e-15 CHCHD2/COX6C/COX8A/MDH2/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/PARK7/UQCRC1/UQCRH 12
reactome B_4_1 R-HSA-1428517 Aerobic respiration and respiratory electron transport 16/36 260/11146 2.33602528244514e-17 6.07366573435737e-15 3.49174305376011e-15 ATP5F1C/ATP5MC3/ATP5ME/ATP5MF/ATP5PF/COX17/COX6C/COX8A/MDH2/NDUFA2/NDUFB10/NDUFB6/NDUFC1/NDUFS5/UQCRC1/UQCRH 16