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Selected Module: B_3_2
Module Info
| Module_Name | B_3_2 |
| Cell_Type | B |
| Name | B_3_2: cytoplasmic translation |
| Meta_Module | B_1 |
| Gene_Number | 28 |
Genes:
COMMD6, EIF3E, EIF3H, EIF3L, NSA2, RACK1, RPL10A, RPL22, RPL26, RPL28, RPL34, RPL35A, RPL36, RPL36A, RPL37, RPL39, RPL41, RPL6, RPLP2, RPS16, RPS18, RPS21, RPS25, RPS27, RPS28, RPS6, RPSA, TOMM7
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| FOXR2 | 3.13630426946188e-14 | EIF3L/RACK1/RPL34/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS6 |
| ZZZ3 | 1.25683913485967e-09 | NSA2/RPL10A/RPL35A/RPL36/RPL37/RPL39/RPL41/RPL6/RPS18 |
| GTF2E2 | 7.1034646492613e-06 | RACK1/RPL36/RPL36A/RPL37/RPL41/RPS28/RPS6 |
| GGAANCGGAANY | 0.00016412920454788 | COMMD6/EIF3H/RACK1/RPL28 |
| PSMB5 | 0.00038344810186323 | RPL10A/RPL28/RPS27/RPS28/RPSA |
| CREB3L2 | 0.00038344810186323 | NSA2/RACK1/RPL35A/RPL37 |
| EPC1 | 0.00089884638291751 | EIF3E/RPL10A/RPL26/RPL35A/RPSA |
| ZNF101 | 0.00223727277630267 | NSA2/RPL26/RPL36/RPS16/TOMM7 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_3_2 | GO:0032040 | small-subunit processome | 4/28 | 74/19960 | 3.33114391004696e-06 | 9.48094805167213e-06 | 2.42755426643099e-06 | RPS16/RPS27/RPS28/RPS6 | 4 |
| hallmark | B_3_2 | HALLMARK_MYC_TARGETS_V1 | HALLMARK_MYC_TARGETS_V1 | 5/7 | 200/4384 | 3.66688760372399e-06 | 1.1000662811172e-05 | 3.85988168813051e-06 | RACK1/RPL22/RPL34/RPL6/RPS6 | 5 |
| GO | B_3_2 | GO:0000028 | ribosomal small subunit assembly | 3/28 | 21/18986 | 3.75311080450834e-06 | 0.00012685514519238 | 0.00010113645957411 | RPS27/RPS28/RPSA | 3 |
| reactome | B_3_2 | R-HSA-9679506 | SARS-CoV Infections | 8/27 | 414/11146 | 4.03683398090188e-06 | 7.74635709848739e-06 | 3.78991525945269e-06 | RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA | 8 |
| MeSH_gene2pubmed | B_3_2 | D011132 | Polyribosomes | 5/28 | 241/26076 | 5.34439379549247e-06 | 0.00019613925229457 | 0.00015273714899749 | RACK1/RPL28/RPL37/RPS18/RPS6 | 5 |
| MeSH_gene2pubmed | B_3_2 | D002876 | Chromosomes, Bacterial | 4/28 | 121/26076 | 8.28552958458734e-06 | 0.00028959898643271 | 0.00022551591801658 | RPL10A/RPL6/RPS18/RPS21 | 4 |
| GO | B_3_2 | GO:0014069 | postsynaptic density | 6/28 | 359/19960 | 8.7535031106562e-06 | 2.313425822102e-05 | 5.9234231575869e-06 | EIF3E/RPL10A/RPL6/RPS18/RPS25/RPS27 | 6 |
| GO | B_3_2 | GO:0032279 | asymmetric synapse | 6/28 | 375/19960 | 1.12191439021167e-05 | 2.76738882918879e-05 | 7.0857750960737e-06 | EIF3E/RPL10A/RPL6/RPS18/RPS25/RPS27 | 6 |
| GO | B_3_2 | GO:0099572 | postsynaptic specialization | 6/28 | 396/19960 | 1.52817905739284e-05 | 3.53391407022094e-05 | 9.04842862929971e-06 | EIF3E/RPL10A/RPL6/RPS18/RPS25/RPS27 | 6 |
| GO | B_3_2 | GO:0098984 | neuron to neuron synapse | 6/28 | 412/19960 | 1.91161556052964e-05 | 4.1605750435057e-05 | 1.06529659719918e-05 | EIF3E/RPL10A/RPL6/RPS18/RPS25/RPS27 | 6 |