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Selected Module: B_3_2


Module Info

Module_Name B_3_2
Cell_Type B
Name B_3_2: cytoplasmic translation
Meta_Module B_1
Gene_Number 28

Genes:

COMMD6, EIF3E, EIF3H, EIF3L, NSA2, RACK1, RPL10A, RPL22, RPL26, RPL28, RPL34, RPL35A, RPL36, RPL36A, RPL37, RPL39, RPL41, RPL6, RPLP2, RPS16, RPS18, RPS21, RPS25, RPS27, RPS28, RPS6, RPSA, TOMM7


UMAP Visualizations


UMAP for B_3_2

UMAP for B_3_2


Word Cloud

Enriched TF

Wordcloud for B_3_2
TF p.adjust Genes
FOXR2 3.13630426946188e-14 EIF3L/RACK1/RPL34/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS6
ZZZ3 1.25683913485967e-09 NSA2/RPL10A/RPL35A/RPL36/RPL37/RPL39/RPL41/RPL6/RPS18
GTF2E2 7.1034646492613e-06 RACK1/RPL36/RPL36A/RPL37/RPL41/RPS28/RPS6
GGAANCGGAANY 0.00016412920454788 COMMD6/EIF3H/RACK1/RPL28
PSMB5 0.00038344810186323 RPL10A/RPL28/RPS27/RPS28/RPSA
CREB3L2 0.00038344810186323 NSA2/RACK1/RPL35A/RPL37
EPC1 0.00089884638291751 EIF3E/RPL10A/RPL26/RPL35A/RPSA
ZNF101 0.00223727277630267 NSA2/RPL26/RPL36/RPS16/TOMM7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
GO B_3_2 GO:0022618 protein-RNA complex assembly 6/28 225/18986 7.85032156725073e-07 3.7905838424725e-05 3.02207867852058e-05 EIF3E/EIF3H/EIF3L/RPS27/RPS28/RPSA 6
GO B_3_2 GO:0071826 protein-RNA complex organization 6/28 234/18986 9.86989121575144e-07 4.17002903865498e-05 3.32459493583206e-05 EIF3E/EIF3H/EIF3L/RPS27/RPS28/RPSA 6
GO B_3_2 GO:0001732 formation of cytoplasmic translation initiation complex 3/28 15/18986 1.29159187000006e-06 4.85064502288911e-05 3.86722244116977e-05 EIF3E/EIF3H/EIF3L 3
GO B_3_2 GO:0005852 eukaryotic translation initiation factor 3 complex 3/28 16/19960 1.36760505841131e-06 5.62237635124648e-06 1.4395842720119e-06 EIF3E/EIF3H/EIF3L 3
GO B_3_2 GO:0033290 eukaryotic 48S preinitiation complex 3/28 17/19960 1.65910352037499e-06 6.13868302538746e-06 1.57178228246052e-06 EIF3E/EIF3H/EIF3L 3
MeSH_gene2pubmed B_3_2 D039102 Poly(A)-Binding Proteins 5/28 190/26076 1.67110211126288e-06 7.21522911568798e-05 5.61862815118109e-05 RACK1/RPL22/RPL28/RPL39/RPS6 5
GO B_3_2 GO:0016282 eukaryotic 43S preinitiation complex 3/28 18/19960 1.98905430749052e-06 6.69045539792265e-06 1.71306112606839e-06 EIF3E/EIF3H/EIF3L 3
GO B_3_2 GO:0070993 translation preinitiation complex 3/28 19/19960 2.35978360020702e-06 7.27599943397166e-06 1.86298705279502e-06 EIF3E/EIF3H/EIF3L 3
MeSH_gene2pubmed B_3_2 D018087 Plastids 3/28 25/26076 2.51002388926828e-06 0.00010235319637349 7.97042673609753e-05 RPS16/RPS18/RPS21 3
MeSH_gene2pubmed B_3_2 D039621 Eukaryotic Initiation Factor-3 4/28 96/26076 3.30011882675516e-06 0.00012748880099148 9.92778129046012e-05 EIF3E/EIF3H/EIF3L/RPS6 4