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Selected Module: B_3_2


Module Info

Module_Name B_3_2
Cell_Type B
Name B_3_2: cytoplasmic translation
Meta_Module B_1
Gene_Number 28

Genes:

COMMD6, EIF3E, EIF3H, EIF3L, NSA2, RACK1, RPL10A, RPL22, RPL26, RPL28, RPL34, RPL35A, RPL36, RPL36A, RPL37, RPL39, RPL41, RPL6, RPLP2, RPS16, RPS18, RPS21, RPS25, RPS27, RPS28, RPS6, RPSA, TOMM7


UMAP Visualizations


UMAP for B_3_2

UMAP for B_3_2


Word Cloud

Enriched TF

Wordcloud for B_3_2
TF p.adjust Genes
FOXR2 3.13630426946188e-14 EIF3L/RACK1/RPL34/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS6
ZZZ3 1.25683913485967e-09 NSA2/RPL10A/RPL35A/RPL36/RPL37/RPL39/RPL41/RPL6/RPS18
GTF2E2 7.1034646492613e-06 RACK1/RPL36/RPL36A/RPL37/RPL41/RPS28/RPS6
GGAANCGGAANY 0.00016412920454788 COMMD6/EIF3H/RACK1/RPL28
PSMB5 0.00038344810186323 RPL10A/RPL28/RPS27/RPS28/RPSA
CREB3L2 0.00038344810186323 NSA2/RACK1/RPL35A/RPL37
EPC1 0.00089884638291751 EIF3E/RPL10A/RPL26/RPL35A/RPSA
ZNF101 0.00223727277630267 NSA2/RPL26/RPL36/RPS16/TOMM7


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_3_2 D010443 Peptide Chain Termination, Translational 21/28 152/26076 3.24285459597664e-42 5.95063818361714e-40 4.63386854109294e-40 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21
MeSH_gene2pubmed B_3_2 D019843 Archaeal Proteins 21/28 179/26076 1.25289450310618e-40 1.83924913055988e-38 1.43225624249823e-38 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21
WikiPathways B_3_2 WP477 Cytoplasmic ribosomal proteins 21/24 88/8836 1.38687248211264e-40 5.13142818381678e-39 4.67157046606364e-39 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21
GO B_3_2 GO:0044391 ribosomal subunit 22/28 186/19960 2.1125142788776e-40 3.90815141592355e-39 1.0006646584157e-39 RACK1/RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 22
reactome B_3_2 R-HSA-156902 Peptide chain elongation 21/27 90/11146 2.58909008695885e-40 2.62607708820112e-39 1.28481162209988e-39 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21
reactome B_3_2 R-HSA-192823 Viral mRNA Translation 21/27 90/11146 2.58909008695885e-40 2.62607708820112e-39 1.28481162209988e-39 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21
reactome B_3_2 R-HSA-156842 Eukaryotic Translation Elongation 21/27 94/11146 7.2389487433419e-40 5.13965360777275e-39 2.51458219505561e-39 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21
reactome B_3_2 R-HSA-2408557 Selenocysteine synthesis 21/27 94/11146 7.2389487433419e-40 5.13965360777275e-39 2.51458219505561e-39 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21
reactome B_3_2 R-HSA-72764 Eukaryotic Translation Termination 21/27 94/11146 7.2389487433419e-40 5.13965360777275e-39 2.51458219505561e-39 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21
reactome B_3_2 R-HSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) 21/27 96/11146 1.18830321724465e-39 7.66995712948822e-39 3.75253647550943e-39 RPL10A/RPL22/RPL26/RPL28/RPL34/RPL35A/RPL36/RPL36A/RPL37/RPL39/RPL41/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS28/RPS6/RPSA 21