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Selected Module: B_3_2
Module Info
| Module_Name | B_3_2 |
| Cell_Type | B |
| Name | B_3_2: cytoplasmic translation |
| Meta_Module | B_1 |
| Gene_Number | 28 |
Genes:
COMMD6, EIF3E, EIF3H, EIF3L, NSA2, RACK1, RPL10A, RPL22, RPL26, RPL28, RPL34, RPL35A, RPL36, RPL36A, RPL37, RPL39, RPL41, RPL6, RPLP2, RPS16, RPS18, RPS21, RPS25, RPS27, RPS28, RPS6, RPSA, TOMM7
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| FOXR2 | 3.13630426946188e-14 | EIF3L/RACK1/RPL34/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS6 |
| ZZZ3 | 1.25683913485967e-09 | NSA2/RPL10A/RPL35A/RPL36/RPL37/RPL39/RPL41/RPL6/RPS18 |
| GTF2E2 | 7.1034646492613e-06 | RACK1/RPL36/RPL36A/RPL37/RPL41/RPS28/RPS6 |
| GGAANCGGAANY | 0.00016412920454788 | COMMD6/EIF3H/RACK1/RPL28 |
| PSMB5 | 0.00038344810186323 | RPL10A/RPL28/RPS27/RPS28/RPSA |
| CREB3L2 | 0.00038344810186323 | NSA2/RACK1/RPL35A/RPL37 |
| EPC1 | 0.00089884638291751 | EIF3E/RPL10A/RPL26/RPL35A/RPSA |
| ZNF101 | 0.00223727277630267 | NSA2/RPL26/RPL36/RPS16/TOMM7 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_3_2 | D017360 | Arabidopsis | 4/28 | 413/26076 | 0.00093966359293513 | 0.0174915561215889 | 0.0136209880596913 | RPS16/RPS18/RPS21/RPS27 | 4 |
| GO | B_3_2 | GO:1901798 | positive regulation of signal transduction by p53 class mediator | 2/28 | 31/18986 | 0.00094981293351326 | 0.0200647982204678 | 0.0159968494065393 | RPL26/RPL37 | 2 |
| MeSH_gene2pubmed | B_3_2 | D009502 | Neutrons | 2/28 | 43/26076 | 0.00097704877518412 | 0.0174915561215889 | 0.0136209880596913 | RPS18/RPS21 | 2 |
| MeSH_gene2pubmed | B_3_2 | D039122 | Poly(A)-Binding Protein I | 2/28 | 43/26076 | 0.00097704877518412 | 0.0174915561215889 | 0.0136209880596913 | RPL28/RPS6 | 2 |
| WikiPathways | B_3_2 | WP5027 | nsp1 from SARS CoV 2 inhibits translation initiation in the host cell | 2/24 | 18/8836 | 0.00105349569851674 | 0.0129931136150397 | 0.0118287236324686 | EIF3E/EIF3H | 2 |
| MeSH_gene2pubmed | B_3_2 | D012336 | RNA, Ribosomal, 16S | 2/28 | 46/26076 | 0.0011176464110926 | 0.0195322015652849 | 0.0152100752186286 | RPS18/RPS21 | 2 |
| MeSH_gene2pubmed | B_3_2 | D029681 | Arabidopsis Proteins | 4/28 | 441/26076 | 0.00119776809938102 | 0.0204456229057132 | 0.0159213727775739 | EIF3E/RACK1/RPS18/RPS27 | 4 |
| GO | B_3_2 | GO:0000460 | maturation of 5.8S rRNA | 2/28 | 35/18986 | 0.00121092957146309 | 0.0227385663974735 | 0.0181285362745351 | NSA2/RPS21 | 2 |
| GO | B_3_2 | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2/28 | 35/18986 | 0.00121092957146309 | 0.0227385663974735 | 0.0181285362745351 | RPS16/RPS21 | 2 |
| GO | B_3_2 | GO:0045296 | cadherin binding | 4/28 | 334/18737 | 0.00144795109694141 | 0.013996860603767 | 0.00914495429647207 | EIF3E/RACK1/RPL34/RPL6 | 4 |