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Selected Module: B_3_2
Module Info
| Module_Name | B_3_2 |
| Cell_Type | B |
| Name | B_3_2: cytoplasmic translation |
| Meta_Module | B_1 |
| Gene_Number | 28 |
Genes:
COMMD6, EIF3E, EIF3H, EIF3L, NSA2, RACK1, RPL10A, RPL22, RPL26, RPL28, RPL34, RPL35A, RPL36, RPL36A, RPL37, RPL39, RPL41, RPL6, RPLP2, RPS16, RPS18, RPS21, RPS25, RPS27, RPS28, RPS6, RPSA, TOMM7
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| FOXR2 | 3.13630426946188e-14 | EIF3L/RACK1/RPL34/RPL6/RPLP2/RPS16/RPS18/RPS21/RPS25/RPS27/RPS6 |
| ZZZ3 | 1.25683913485967e-09 | NSA2/RPL10A/RPL35A/RPL36/RPL37/RPL39/RPL41/RPL6/RPS18 |
| GTF2E2 | 7.1034646492613e-06 | RACK1/RPL36/RPL36A/RPL37/RPL41/RPS28/RPS6 |
| GGAANCGGAANY | 0.00016412920454788 | COMMD6/EIF3H/RACK1/RPL28 |
| PSMB5 | 0.00038344810186323 | RPL10A/RPL28/RPS27/RPS28/RPSA |
| CREB3L2 | 0.00038344810186323 | NSA2/RACK1/RPL35A/RPL37 |
| EPC1 | 0.00089884638291751 | EIF3E/RPL10A/RPL26/RPL35A/RPSA |
| ZNF101 | 0.00223727277630267 | NSA2/RPL26/RPL36/RPS16/TOMM7 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_3_2 | GO:0005925 | focal adhesion | 6/28 | 424/19960 | 2.24744666301475e-05 | 4.61975147397477e-05 | 1.18286666474461e-05 | RPL10A/RPL22/RPL6/RPLP2/RPS16/RPS18 | 6 |
| GO | B_3_2 | GO:0030055 | cell-substrate junction | 6/28 | 434/19960 | 2.56237863517025e-05 | 4.98989523691049e-05 | 1.27764031670539e-05 | RPL10A/RPL22/RPL6/RPLP2/RPS16/RPS18 | 6 |
| MeSH_gene2pubmed | B_3_2 | D017343 | Genes, Plant | 4/28 | 162/26076 | 2.61615692469058e-05 | 0.00087284508305585 | 0.00067970010052965 | RPL41/RPS16/RPS18/RPS27 | 4 |
| MeSH_gene2pubmed | B_3_2 | D018749 | RNA, Plant | 3/28 | 57/26076 | 3.12056482718003e-05 | 0.00099586721006528 | 0.0007754996343976 | RPS16/RPS18/RPS27 | 3 |
| MeSH_gene2pubmed | B_3_2 | D018506 | Gene Expression Regulation, Plant | 4/28 | 176/26076 | 3.61803055283635e-05 | 0.00110651434407578 | 0.00086166253955707 | RPS16/RPS18/RPS21/RPS6 | 4 |
| MeSH_gene2pubmed | B_3_2 | D002736 | Chloroplasts | 3/28 | 61/26076 | 3.8272977029556e-05 | 0.00112369460558776 | 0.00087504111692837 | RPS16/RPS18/RPS21 | 3 |
| GO | B_3_2 | GO:0002183 | cytoplasmic translational initiation | 3/28 | 45/18986 | 3.91047274310353e-05 | 0.00120158162469908 | 0.00095797227008086 | EIF3E/EIF3H/EIF3L | 3 |
| MeSH_gene2pubmed | B_3_2 | D010448 | Peptide Initiation Factors | 5/28 | 387/26076 | 5.20527635149475e-05 | 0.00146948955461429 | 0.00114431783759581 | EIF3E/EIF3H/EIF3L/RPS18/RPS21 | 5 |
| GO | B_3_2 | GO:0003743 | translation initiation factor activity | 3/28 | 51/18737 | 5.9318089349198e-05 | 0.00172022459112674 | 0.00112392169293217 | EIF3E/EIF3H/EIF3L | 3 |
| GO | B_3_2 | GO:0030490 | maturation of SSU-rRNA | 3/28 | 54/18986 | 6.77501614591279e-05 | 0.0019082962144321 | 0.00152140713452077 | RPS16/RPS21/RPS28 | 3 |