Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_3_1
Module Info
| Module_Name | B_3_1 |
| Cell_Type | B |
| Name | B_3_1: Protein processing in endoplasmic reticulum |
| Meta_Module | B_2 |
| Gene_Number | 47 |
Genes:
ALG5, ARF4, ARFGAP3, ATF4, B4GALT3, CD59, COPG1, DAD1, DDOST, DERL1, DERL2, DERL3, DNAJC1, ERGIC3, ERLEC1, FKBP2, HM13, IDH2, ISG20, ITM2C, KDELR1, KLF13, LRPAP1, MGAT1, MORF4L2, NUCB1, NUCB2, OS9, P4HB, RPN1, RPN2, SAR1B, SEC61A1, SEC61B, SRP54, SRPRA, SRPRB, SSR1, SSR2, ST6GALNAC4, TMBIM6, TMCO1, TMEM208, TNFRSF17, TXNDC15, UBE2J1, ZBP1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| XBP1 | 0.00087721865727556 | ARFGAP3/KDELR1/MORF4L2/SEC61A1/SRPRA |
| HTF | 0.00088044164334352 | HM13/MORF4L2/SEC61A1/SRP54 |
| STAT1 | 0.0049985900069652 | DDOST/ITM2C/MORF4L2/NUCB1/TMCO1 |
| GABP | 0.0049985900069652 | DDOST/DERL1/SRP54/TMCO1/TMEM208 |
| NRF2 | 0.0049985900069652 | DDOST/DNAJC1/ITM2C/TMCO1/TMEM208 |
| FOXO4 | 0.0206509811700283 | COPG1/ERLEC1/FKBP2/SRP54/TMCO1 |
| FOXR2 | 0.0239983226037003 | HM13/P4HB/SRP54/SSR2 |
| GGAANCGGAANY | 0.0249993647968756 | SEC61A1/SRP54/TMCO1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_3_1 | R-HSA-9694516 | SARS-CoV-2 Infection | 7/36 | 299/11146 | 3.98610436600151e-05 | 0.00033687972806147 | 0.00020968257673391 | DAD1/DDOST/MGAT1/RPN1/RPN2/SAR1B/ST6GALNAC4 | 7 |
| reactome | B_3_1 | R-HSA-9679506 | SARS-CoV Infections | 8/36 | 414/11146 | 4.10114451553102e-05 | 0.00033687972806147 | 0.00020968257673391 | DAD1/DDOST/MGAT1/RPN1/RPN2/SAR1B/ST6GALNAC4/ZBP1 | 8 |
| GO | B_3_1 | GO:0032386 | regulation of intracellular transport | 6/47 | 272/18986 | 5.36647640902524e-05 | 0.00080355923071983 | 0.00062732771318799 | DERL2/DERL3/ERGIC3/ERLEC1/OS9/UBE2J1 | 6 |
| reactome | B_3_1 | R-HSA-5358346 | Hedgehog ligand biogenesis | 4/36 | 65/11146 | 5.39310069962631e-05 | 0.00041347105363801 | 0.00025735498075409 | DERL2/ERLEC1/OS9/P4HB | 4 |
| GO | B_3_1 | GO:0065002 | intracellular protein transmembrane transport | 3/47 | 31/18986 | 6.087369594472e-05 | 0.00088813161519347 | 0.00069335221831772 | SEC61A1/SEC61B/SRP54 | 3 |
| GO | B_3_1 | GO:0051223 | regulation of protein transport | 7/47 | 446/18986 | 0.00010512641640162 | 0.00149542327331314 | 0.00116745651898649 | DERL2/DERL3/DNAJC1/ERGIC3/ERLEC1/OS9/UBE2J1 | 7 |
| GO | B_3_1 | GO:0016758 | hexosyltransferase activity | 5/47 | 197/18737 | 0.00013087367208503 | 0.00558394334229461 | 0.00408693221598866 | ALG5/B4GALT3/MGAT1/RPN1/RPN2 | 5 |
| MeSH_gene2pubmed | B_3_1 | D006656 | Protamine Kinase | 3/47 | 56/26076 | 0.0001422585671979 | 0.00878841815133741 | 0.00789493451876107 | DERL1/DERL2/DERL3 | 3 |
| MeSH_gene2pubmed | B_3_1 | D000514 | alpha 1-Antichymotrypsin | 4/47 | 154/26076 | 0.00017124748293104 | 0.0100224842641749 | 0.00900353802224726 | DNAJC1/SSR1/SSR2/TXNDC15 | 4 |
| reactome | B_3_1 | R-HSA-532668 | N-glycan trimming in the ER and Calnexin/Calreticulin cycle | 3/36 | 35/11146 | 0.00018864876369934 | 0.00135591298908907 | 0.00084395499549708 | DERL1/DERL2/OS9 | 3 |