Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_3_1
Module Info
| Module_Name | B_3_1 |
| Cell_Type | B |
| Name | B_3_1: Protein processing in endoplasmic reticulum |
| Meta_Module | B_2 |
| Gene_Number | 47 |
Genes:
ALG5, ARF4, ARFGAP3, ATF4, B4GALT3, CD59, COPG1, DAD1, DDOST, DERL1, DERL2, DERL3, DNAJC1, ERGIC3, ERLEC1, FKBP2, HM13, IDH2, ISG20, ITM2C, KDELR1, KLF13, LRPAP1, MGAT1, MORF4L2, NUCB1, NUCB2, OS9, P4HB, RPN1, RPN2, SAR1B, SEC61A1, SEC61B, SRP54, SRPRA, SRPRB, SSR1, SSR2, ST6GALNAC4, TMBIM6, TMCO1, TMEM208, TNFRSF17, TXNDC15, UBE2J1, ZBP1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| XBP1 | 0.00087721865727556 | ARFGAP3/KDELR1/MORF4L2/SEC61A1/SRPRA |
| HTF | 0.00088044164334352 | HM13/MORF4L2/SEC61A1/SRP54 |
| STAT1 | 0.0049985900069652 | DDOST/ITM2C/MORF4L2/NUCB1/TMCO1 |
| GABP | 0.0049985900069652 | DDOST/DERL1/SRP54/TMCO1/TMEM208 |
| NRF2 | 0.0049985900069652 | DDOST/DNAJC1/ITM2C/TMCO1/TMEM208 |
| FOXO4 | 0.0206509811700283 | COPG1/ERLEC1/FKBP2/SRP54/TMCO1 |
| FOXR2 | 0.0239983226037003 | HM13/P4HB/SRP54/SSR2 |
| GGAANCGGAANY | 0.0249993647968756 | SEC61A1/SRP54/TMCO1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_3_1 | GO:0090150 | establishment of protein localization to membrane | 8/47 | 280/18986 | 3.86812821675852e-07 | 7.58953432874344e-06 | 5.92504576214916e-06 | SEC61A1/SEC61B/SRP54/SRPRA/SRPRB/SSR1/SSR2/TMCO1 | 8 |
| MeSH_gene2pubmed | B_3_1 | D020823 | ADP-Ribosylation Factor 1 | 6/47 | 164/26076 | 4.89781463635163e-07 | 0.00010496315685159 | 9.429196881121e-05 | ARF4/ARFGAP3/COPG1/DERL1/KDELR1/SAR1B | 6 |
| MeSH_gene2pubmed | B_3_1 | D020755 | Coat Protein Complex I | 5/47 | 89/26076 | 5.66347968623706e-07 | 0.00010496315685159 | 9.429196881121e-05 | ARF4/ARFGAP3/COPG1/KDELR1/SAR1B | 5 |
| reactome | B_3_1 | R-HSA-5678895 | Defective CFTR causes cystic fibrosis | 5/36 | 61/11146 | 1.37495543441114e-06 | 1.97649843696601e-05 | 1.23022328342049e-05 | DERL1/DERL2/DERL3/ERLEC1/OS9 | 5 |
| GO | B_3_1 | GO:0006605 | protein targeting | 8/47 | 335/18986 | 1.49234184472278e-06 | 2.83047503215753e-05 | 2.2097131876246e-05 | OS9/SEC61A1/SEC61B/SRP54/SRPRA/SRPRB/SSR1/SSR2 | 8 |
| MeSH_gene2pubmed | B_3_1 | D037282 | Calreticulin | 6/47 | 200/26076 | 1.5606705473386e-06 | 0.00023634868132181 | 0.00021232004787429 | CD59/KDELR1/NUCB1/P4HB/SSR1/SSR2 | 6 |
| MeSH_gene2pubmed | B_3_1 | D018271 | Signal Recognition Particle | 4/47 | 48/26076 | 1.70035022533681e-06 | 0.00023634868132181 | 0.00021232004787429 | SEC61B/SRP54/SRPRA/SRPRB | 4 |
| GO | B_3_1 | GO:0033157 | regulation of intracellular protein transport | 6/47 | 151/18986 | 1.87963333951204e-06 | 3.45003667800758e-05 | 2.69339650008176e-05 | DERL2/DERL3/ERGIC3/ERLEC1/OS9/UBE2J1 | 6 |
| MeSH_gene2pubmed | B_3_1 | D014415 | D014415 | 7/47 | 345/26076 | 2.66546809963318e-06 | 0.00032933339186578 | 0.00029585137152653 | ATF4/B4GALT3/DAD1/DERL1/DERL2/DERL3/SAR1B | 7 |
| GO | B_3_1 | GO:0016757 | glycosyltransferase activity | 7/47 | 267/18737 | 4.26249813238968e-06 | 0.00027279988047294 | 0.00019966438620141 | ALG5/ARF4/B4GALT3/MGAT1/RPN1/RPN2/ST6GALNAC4 | 7 |