Module Explorer
Instructions
- Enter a module name.
- Click Submit to search for the detailed information of the module.
- Results will appear below if available.
Selected Module: B_3_1
Module Info
| Module_Name | B_3_1 |
| Cell_Type | B |
| Name | B_3_1: Protein processing in endoplasmic reticulum |
| Meta_Module | B_2 |
| Gene_Number | 47 |
Genes:
ALG5, ARF4, ARFGAP3, ATF4, B4GALT3, CD59, COPG1, DAD1, DDOST, DERL1, DERL2, DERL3, DNAJC1, ERGIC3, ERLEC1, FKBP2, HM13, IDH2, ISG20, ITM2C, KDELR1, KLF13, LRPAP1, MGAT1, MORF4L2, NUCB1, NUCB2, OS9, P4HB, RPN1, RPN2, SAR1B, SEC61A1, SEC61B, SRP54, SRPRA, SRPRB, SSR1, SSR2, ST6GALNAC4, TMBIM6, TMCO1, TMEM208, TNFRSF17, TXNDC15, UBE2J1, ZBP1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| XBP1 | 0.00087721865727556 | ARFGAP3/KDELR1/MORF4L2/SEC61A1/SRPRA |
| HTF | 0.00088044164334352 | HM13/MORF4L2/SEC61A1/SRP54 |
| STAT1 | 0.0049985900069652 | DDOST/ITM2C/MORF4L2/NUCB1/TMCO1 |
| GABP | 0.0049985900069652 | DDOST/DERL1/SRP54/TMCO1/TMEM208 |
| NRF2 | 0.0049985900069652 | DDOST/DNAJC1/ITM2C/TMCO1/TMEM208 |
| FOXO4 | 0.0206509811700283 | COPG1/ERLEC1/FKBP2/SRP54/TMCO1 |
| FOXR2 | 0.0239983226037003 | HM13/P4HB/SRP54/SSR2 |
| GGAANCGGAANY | 0.0249993647968756 | SEC61A1/SRP54/TMCO1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_3_1 | R-HSA-8963898 | Plasma lipoprotein assembly | 2/36 | 19/11146 | 0.00167555253481959 | 0.00713661264830565 | 0.00444201061862503 | P4HB/SAR1B | 2 |
| hallmark | B_3_1 | HALLMARK_UNFOLDED_PROTEIN_RESPONSE | HALLMARK_UNFOLDED_PROTEIN_RESPONSE | 4/21 | 113/4384 | 0.00178457575666043 | 0.0392606666465295 | 0.0375700159296933 | ATF4/SRPRA/SRPRB/SSR1 | 4 |
| WikiPathways | B_3_1 | WP3888 | VEGFA VEGFR2 signaling | 6/28 | 432/8836 | 0.00198238950349094 | 0.0297358425523641 | 0.0236495589890147 | ARF4/ATF4/COPG1/IDH2/P4HB/SRP54 | 6 |
| GO | B_3_1 | GO:0032469 | endoplasmic reticulum calcium ion homeostasis | 2/47 | 27/18986 | 0.00202385929820327 | 0.0245016157590991 | 0.0191280766817868 | TMBIM6/TMCO1 | 2 |
| reactome | B_3_1 | R-HSA-901032 | ER Quality Control Compartment (ERQC) | 2/36 | 21/11146 | 0.00204936161228931 | 0.00841702090761682 | 0.00523896953517569 | DERL2/OS9 | 2 |
| GO | B_3_1 | GO:0005525 | GTP binding | 5/47 | 380/18737 | 0.00254715990322683 | 0.0376274229994891 | 0.0275398079519287 | ARF4/SAR1B/SRP54/SRPRA/SRPRB | 5 |
| GO | B_3_1 | GO:0001965 | G-protein alpha-subunit binding | 2/47 | 30/18737 | 0.00256166841971428 | 0.0376274229994891 | 0.0275398079519287 | NUCB1/NUCB2 | 2 |
| GO | B_3_1 | GO:0005085 | guanyl-nucleotide exchange factor activity | 4/47 | 230/18737 | 0.00260910696392656 | 0.0376274229994891 | 0.0275398079519287 | ARF4/NUCB1/NUCB2/SEC61B | 4 |
| GO | B_3_1 | GO:0043022 | ribosome binding | 3/47 | 110/18737 | 0.00264567817965158 | 0.0376274229994891 | 0.0275398079519287 | SEC61A1/SEC61B/TMCO1 | 3 |
| GO | B_3_1 | GO:0045048 | protein insertion into ER membrane | 2/47 | 31/18986 | 0.00266434454870683 | 0.0315835843377956 | 0.0246568727972431 | SEC61A1/TMCO1 | 2 |