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Selected Module: B_1_2


Module Info

Module_Name B_1_2
Cell_Type B
Name B_1_2: endoplasmic reticulum protein-containing complex
Meta_Module B_2
Gene_Number 27

Genes:

CRELD2, DNAJB11, DNAJC3, EDEM2, FKBP11, HDLBP, HSP90B1, HSPA5, LMAN1, LMAN2, MYDGF, MZB1, PDIA4, PDIA6, PPIB, PRDX4, RABAC1, SEC11C, SELENOK, SELENOS, SPCS1, SPCS2, SPCS3, SSR3, TMED10, TMED9, TRAM1


UMAP Visualizations


UMAP for B_1_2

UMAP for B_1_2


Word Cloud

Enriched TF

Wordcloud for B_1_2
TF p.adjust Genes
USF 0.00826796953778515 FKBP11/PRDX4/SEC11C/TMED10
PGM3 0.00826796953778515 HDLBP/MYDGF/PPIB/RABAC1


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
MeSH_gene2pubmed B_1_2 D019704 Protein Disulfide-Isomerases 7/27 165/26076 2.85299237100609e-10 8.23088299035256e-08 6.1714729709658e-08 HSP90B1/HSPA5/LMAN1/PDIA4/PDIA6/PPIB/SSR3 7
GO B_1_2 GO:0005793 endoplasmic reticulum-Golgi intermediate compartment 7/27 135/19960 4.39094233321565e-10 6.80596061648426e-09 2.42657339467181e-09 HSPA5/LMAN1/LMAN2/MYDGF/PDIA6/TMED10/TMED9 7
MeSH_gene2pubmed B_1_2 D001678 Organelle Biogenesis 6/27 97/26076 6.29441840605467e-10 1.45275176811742e-07 1.08926566942672e-07 HSP90B1/HSPA5/PDIA4/PDIA6/PPIB/TMED10 6
GO B_1_2 GO:0070972 protein localization to endoplasmic reticulum 6/25 83/18986 9.62526820843877e-10 1.11893742923101e-07 8.08015936445254e-08 HSPA5/SPCS1/SPCS2/SPCS3/SSR3/TRAM1 6
MeSH_gene2pubmed B_1_2 D037282 Calreticulin 7/27 200/26076 1.09593566300276e-09 2.10784959184198e-07 1.58045458769872e-07 DNAJB11/HSP90B1/HSPA5/LMAN2/PDIA4/PPIB/SSR3 7
GO B_1_2 GO:0034976 response to endoplasmic reticulum stress 8/25 277/18986 1.61897334670298e-09 1.50564521243378e-07 1.08726841599632e-07 DNAJC3/EDEM2/HSP90B1/HSPA5/PDIA4/PDIA6/SELENOK/SELENOS 8
MeSH_gene2pubmed B_1_2 D005127 Eye Color 6/27 116/26076 1.86535026958843e-09 3.0751631587215e-07 2.30574123549127e-07 HSP90B1/HSPA5/PDIA4/PDIA6/PPIB/TMED10 6
GO B_1_2 GO:0006465 signal peptide processing 4/25 14/18986 2.3189621089516e-09 1.79719563443749e-07 1.29780511009747e-07 SEC11C/SPCS1/SPCS2/SPCS3 4
MeSH_gene2pubmed B_1_2 D018000 Receptors, Peptide 8/27 366/26076 2.4550621409704e-09 3.54142713834981e-07 2.65534352615483e-07 HDLBP/HSP90B1/LMAN1/PPIB/SSR3/TMED10/TMED9/TRAM1 8
KEGG B_1_2 hsa03060 Protein export 5/17 31/8541 2.69569598034922e-09 2.56091118133176e-08 2.27005977292566e-08 HSPA5/SEC11C/SPCS1/SPCS2/SPCS3 5