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Selected Module: B_1_2
Module Info
| Module_Name | B_1_2 |
| Cell_Type | B |
| Name | B_1_2: endoplasmic reticulum protein-containing complex |
| Meta_Module | B_2 |
| Gene_Number | 27 |
Genes:
CRELD2, DNAJB11, DNAJC3, EDEM2, FKBP11, HDLBP, HSP90B1, HSPA5, LMAN1, LMAN2, MYDGF, MZB1, PDIA4, PDIA6, PPIB, PRDX4, RABAC1, SEC11C, SELENOK, SELENOS, SPCS1, SPCS2, SPCS3, SSR3, TMED10, TMED9, TRAM1
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| USF | 0.00826796953778515 | FKBP11/PRDX4/SEC11C/TMED10 |
| PGM3 | 0.00826796953778515 | HDLBP/MYDGF/PPIB/RABAC1 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_1_2 | D053764 | Presenilin-1 | 3/27 | 237/26076 | 0.001845575306157 | 0.0338062524334156 | 0.025347751072031 | HSPA5/LMAN1/TMED10 | 3 |
| WikiPathways | B_1_2 | WP5380 | 5q35 copy number variation | 3/20 | 111/8836 | 0.00188236475244683 | 0.0127981975821333 | 0.00869147543778151 | LMAN2/TMED10/TMED9 | 3 |
| GO | B_1_2 | GO:0006890 | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum | 2/25 | 52/18986 | 0.00211997806821329 | 0.0246447450429795 | 0.0177966579936853 | LMAN2/TMED10 | 2 |
| WikiPathways | B_1_2 | WP3995 | Prion disease pathway | 2/20 | 32/8836 | 0.00231800782035659 | 0.0127981975821333 | 0.00869147543778151 | HSP90B1/HSPA5 | 2 |
| MeSH_gene2pubmed | B_1_2 | D022061 | Tacrolimus Binding Protein 1A | 2/27 | 71/26076 | 0.00245511068393881 | 0.0442687145197717 | 0.0331924503650938 | FKBP11/PPIB | 2 |
| MeSH_gene2pubmed | B_1_2 | D001232 | Aspergillus fumigatus | 2/27 | 74/26076 | 0.00266341729428884 | 0.0472859008862973 | 0.0354547209053511 | LMAN1/PPIB | 2 |
| GO | B_1_2 | GO:0016032 | viral process | 4/25 | 452/18986 | 0.00269644857445441 | 0.0305816728566171 | 0.0220838792105509 | EDEM2/PPIB/SPCS1/SPCS3 | 4 |
| WikiPathways | B_1_2 | WP2003 | miR targeted genes in leukocytes | 3/20 | 127/8836 | 0.00276451673670758 | 0.0127981975821333 | 0.00869147543778151 | PPIB/TMED10/TRAM1 | 3 |
| GO | B_1_2 | GO:0016667 | oxidoreductase activity, acting on a sulfur group of donors | 2/27 | 55/18737 | 0.00283295298696659 | 0.0130751676321535 | 0.00688166717481763 | PDIA4/PDIA6 | 2 |
| WikiPathways | B_1_2 | WP2006 | miR targeted genes in squamous cell | 3/20 | 129/8836 | 0.00288991558306235 | 0.0127981975821333 | 0.00869147543778151 | SPCS3/TMED10/TRAM1 | 3 |