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Selected Module: B_1_1


Module Info

Module_Name B_1_1
Cell_Type B
Name B_1_1: RNA, Nuclear
Meta_Module B_1
Gene_Number 33

Genes:

EEF1A1, EEF1B2, NACA, RPL10, RPL11, RPL12, RPL13, RPL14, RPL18, RPL19, RPL24, RPL29, RPL3, RPL30, RPL32, RPL5, RPL7A, RPL8, RPLP1, RPS12, RPS13, RPS14, RPS15, RPS15A, RPS19, RPS23, RPS27A, RPS3, RPS4X, RPS5, RPS7, RPS8, RPS9


UMAP Visualizations


UMAP for B_1_1

UMAP for B_1_1


Word Cloud

Enriched TF

Wordcloud for B_1_1
TF p.adjust Genes
ZZZ3 7.91479601155885e-19 EEF1A1/NACA/RPL11/RPL24/RPL29/RPL3/RPL32/RPL5/RPL8/RPS14/RPS15A/RPS23/RPS3/RPS4X/RPS7
RUVBL1 1.37266720166462e-07 EEF1A1/NACA/RPL11/RPL18/RPL24/RPS12/RPS14
PSMB5 1.37266720166462e-07 EEF1A1/RPL10/RPL12/RPL3/RPL32/RPLP1/RPS12/RPS9
NPM1 8.44610226544066e-06 RPL10/RPL12/RPL18/RPL7A/RPS19/RPS7/RPS8
GTF2E2 1.69180553701949e-05 EEF1A1/RPL10/RPL12/RPLP1/RPS12/RPS8/RPS9
HJURP 2.71150205332253e-05 EEF1A1/RPL3/RPL7A/RPS15A
FOXR2 0.00017734117507332 EEF1A1/RPL32/RPL8/RPS14/RPS5
PER1 0.00017734117507332 EEF1A1/RPL12/RPL3


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
KEGG B_1_1 hsa05171 Coronavirus disease - COVID-19 30/32 238/8541 1.66003259618131e-45 1.24502444713598e-44 1.13581177633458e-44 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
reactome B_1_1 R-HSA-71291 Metabolism of amino acids and derivatives 30/32 367/11146 4.82895796562432e-43 7.22486403318408e-42 6.06063550341514e-42 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
GO B_1_1 GO:0022625 cytosolic large ribosomal subunit 16/33 57/19960 2.16796354457147e-33 2.38475989902861e-32 1.36924013341356e-32 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1 16
reactome B_1_1 R-HSA-9735869 SARS-CoV-1 modulates host translation machinery 15/32 37/11146 1.33100579749362e-30 1.91763427861117e-29 1.60862299112289e-29 EEF1A1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 15
GO B_1_1 GO:0022627 cytosolic small ribosomal subunit 14/33 42/19960 2.32076230938192e-30 2.04227083225609e-29 1.17259569316139e-29 RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 14
GO B_1_1 GO:0015934 large ribosomal subunit 16/33 114/19960 4.61192343121309e-28 3.3820771828896e-27 1.94186249735288e-27 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1 16
GO B_1_1 GO:0015935 small ribosomal subunit 14/33 74/19960 1.94573844176231e-26 1.22303559196488e-25 7.02221392515722e-26 RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 14
reactome B_1_1 R-HSA-9754678 SARS-CoV-2 modulates host translation machinery 14/32 51/11146 1.10894080589331e-25 1.54063561961607e-24 1.2923746234095e-24 RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 14
reactome B_1_1 R-HSA-72695 Formation of the ternary complex, and subsequently, the 43S complex 14/32 52/11146 1.51520121409717e-25 2.0324595595993e-24 1.70494510479173e-24 RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 14
MeSH_gene2pubmed B_1_1 D038621 Regulatory Sequences, Ribonucleic Acid 14/33 116/26076 4.02527324281999e-25 3.30519658493775e-23 2.44811939914198e-23 RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 14