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Selected Module: B_1_1


Module Info

Module_Name B_1_1
Cell_Type B
Name B_1_1: RNA, Nuclear
Meta_Module B_1
Gene_Number 33

Genes:

EEF1A1, EEF1B2, NACA, RPL10, RPL11, RPL12, RPL13, RPL14, RPL18, RPL19, RPL24, RPL29, RPL3, RPL30, RPL32, RPL5, RPL7A, RPL8, RPLP1, RPS12, RPS13, RPS14, RPS15, RPS15A, RPS19, RPS23, RPS27A, RPS3, RPS4X, RPS5, RPS7, RPS8, RPS9


UMAP Visualizations


UMAP for B_1_1

UMAP for B_1_1


Word Cloud

Enriched TF

Wordcloud for B_1_1
TF p.adjust Genes
ZZZ3 7.91479601155885e-19 EEF1A1/NACA/RPL11/RPL24/RPL29/RPL3/RPL32/RPL5/RPL8/RPS14/RPS15A/RPS23/RPS3/RPS4X/RPS7
RUVBL1 1.37266720166462e-07 EEF1A1/NACA/RPL11/RPL18/RPL24/RPS12/RPS14
PSMB5 1.37266720166462e-07 EEF1A1/RPL10/RPL12/RPL3/RPL32/RPLP1/RPS12/RPS9
NPM1 8.44610226544066e-06 RPL10/RPL12/RPL18/RPL7A/RPS19/RPS7/RPS8
GTF2E2 1.69180553701949e-05 EEF1A1/RPL10/RPL12/RPLP1/RPS12/RPS8/RPS9
HJURP 2.71150205332253e-05 EEF1A1/RPL3/RPL7A/RPS15A
FOXR2 0.00017734117507332 EEF1A1/RPL32/RPL8/RPS14/RPS5
PER1 0.00017734117507332 EEF1A1/RPL12/RPL3


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_1_1 R-HSA-975956 Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) 30/32 96/11146 3.58398323809392e-62 2.32361579936422e-60 1.94918386633178e-60 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
reactome B_1_1 R-HSA-72689 Formation of a pool of free 40S subunits 30/32 102/11146 3.08561943607863e-61 1.50038245079323e-59 1.25860792787418e-59 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
reactome B_1_1 R-HSA-9633012 Response of EIF2AK4 (GCN2) to amino acid deficiency 30/32 102/11146 3.08561943607863e-61 1.50038245079323e-59 1.25860792787418e-59 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
WikiPathways B_1_1 WP477 Cytoplasmic ribosomal proteins 30/32 88/8836 1.66261666002606e-60 1.99513999203127e-59 1.75012280002743e-59 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
GO B_1_1 GO:0002181 cytoplasmic translation 30/33 165/18986 4.88988410530231e-60 1.6967897845399e-57 1.33313682449821e-57 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
reactome B_1_1 R-HSA-156827 L13a-mediated translational silencing of Ceruloplasmin expression 30/32 112/11146 8.14861469939583e-60 3.52201235340553e-58 2.95446848750024e-58 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
reactome B_1_1 R-HSA-1799339 SRP-dependent cotranslational protein targeting to membrane 30/32 113/11146 1.10919516115e-59 3.92251743352136e-58 3.29043540628229e-58 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
reactome B_1_1 R-HSA-72706 GTP hydrolysis and joining of the 60S ribosomal subunit 30/32 113/11146 1.10919516115e-59 3.92251743352136e-58 3.29043540628229e-58 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
reactome B_1_1 R-HSA-927802 Nonsense-Mediated Decay (NMD) 30/32 116/11146 2.74563903533661e-59 8.21579680573802e-58 6.89188745712025e-58 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30
reactome B_1_1 R-HSA-975957 Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) 30/32 116/11146 2.74563903533661e-59 8.21579680573802e-58 6.89188745712025e-58 RPL10/RPL11/RPL12/RPL13/RPL14/RPL18/RPL19/RPL24/RPL29/RPL3/RPL30/RPL32/RPL5/RPL7A/RPL8/RPLP1/RPS12/RPS13/RPS14/RPS15/RPS15A/RPS19/RPS23/RPS27A/RPS3/RPS4X/RPS5/RPS7/RPS8/RPS9 30