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Selected Module: B_1_1
Module Info
| Module_Name | B_1_1 |
| Cell_Type | B |
| Name | B_1_1: RNA, Nuclear |
| Meta_Module | B_1 |
| Gene_Number | 33 |
Genes:
EEF1A1, EEF1B2, NACA, RPL10, RPL11, RPL12, RPL13, RPL14, RPL18, RPL19, RPL24, RPL29, RPL3, RPL30, RPL32, RPL5, RPL7A, RPL8, RPLP1, RPS12, RPS13, RPS14, RPS15, RPS15A, RPS19, RPS23, RPS27A, RPS3, RPS4X, RPS5, RPS7, RPS8, RPS9
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| ZZZ3 | 7.91479601155885e-19 | EEF1A1/NACA/RPL11/RPL24/RPL29/RPL3/RPL32/RPL5/RPL8/RPS14/RPS15A/RPS23/RPS3/RPS4X/RPS7 |
| RUVBL1 | 1.37266720166462e-07 | EEF1A1/NACA/RPL11/RPL18/RPL24/RPS12/RPS14 |
| PSMB5 | 1.37266720166462e-07 | EEF1A1/RPL10/RPL12/RPL3/RPL32/RPLP1/RPS12/RPS9 |
| NPM1 | 8.44610226544066e-06 | RPL10/RPL12/RPL18/RPL7A/RPS19/RPS7/RPS8 |
| GTF2E2 | 1.69180553701949e-05 | EEF1A1/RPL10/RPL12/RPLP1/RPS12/RPS8/RPS9 |
| HJURP | 2.71150205332253e-05 | EEF1A1/RPL3/RPL7A/RPS15A |
| FOXR2 | 0.00017734117507332 | EEF1A1/RPL32/RPL8/RPS14/RPS5 |
| PER1 | 0.00017734117507332 | EEF1A1/RPL12/RPL3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_1_1 | D001937 | Brassica | 2/33 | 45/26076 | 0.00148610035582966 | 0.0152531689299739 | 0.0112978389624477 | RPL13/RPS3 | 2 |
| MeSH_gene2pubmed | B_1_1 | D028961 | beta Karyopherins | 3/33 | 183/26076 | 0.00158884709834032 | 0.0160843562421027 | 0.0119134894179808 | RPL13/RPL5/RPS7 | 3 |
| GO | B_1_1 | GO:0000462 | maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA) | 2/33 | 35/18986 | 0.00168170801146497 | 0.0171633141170102 | 0.0134849032498275 | RPS19/RPS8 | 2 |
| MeSH_gene2pubmed | B_1_1 | D012331 | RNA, Fungal | 3/33 | 188/26076 | 0.00171604428484955 | 0.0171372530608624 | 0.0126933574412769 | RPL32/RPL7A/RPS5 | 3 |
| MeSH_gene2pubmed | B_1_1 | D005199 | Fanconi Anemia | 3/33 | 190/26076 | 0.00176865627992577 | 0.0174271598782019 | 0.0129080879377038 | RPL18/RPS13/RPS19 | 3 |
| reactome | B_1_1 | R-HSA-9613829 | Chaperone Mediated Autophagy | 2/32 | 22/11146 | 0.00177969495359255 | 0.0173075334236876 | 0.0145185640950971 | EEF1A1/RPS27A | 2 |
| MeSH_gene2pubmed | B_1_1 | D011072 | Poly U | 2/33 | 51/26076 | 0.00190486243025976 | 0.0185222807363416 | 0.0137192307996548 | EEF1A1/RPL8 | 2 |
| MeSH_gene2pubmed | B_1_1 | D009943 | Organophosphorus Compounds | 3/33 | 196/26076 | 0.00193252515831168 | 0.0185472219739264 | 0.0137377044746695 | RPS5/RPS7/RPS9 | 3 |
| MeSH_gene2pubmed | B_1_1 | D012879 | Skin Physiological Phenomena | 3/33 | 200/26076 | 0.00204686691407177 | 0.0193927519166543 | 0.0143639783443633 | RPL5/RPLP1/RPS13 | 3 |
| MeSH_gene2pubmed | B_1_1 | D051736 | Proto-Oncogene Proteins c-mdm2 | 4/33 | 440/26076 | 0.00222139257123832 | 0.0206895758668602 | 0.0153245202631825 | EEF1A1/RPL11/RPL5/RPS7 | 4 |