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Selected Module: B_1_1
Module Info
| Module_Name | B_1_1 |
| Cell_Type | B |
| Name | B_1_1: RNA, Nuclear |
| Meta_Module | B_1 |
| Gene_Number | 33 |
Genes:
EEF1A1, EEF1B2, NACA, RPL10, RPL11, RPL12, RPL13, RPL14, RPL18, RPL19, RPL24, RPL29, RPL3, RPL30, RPL32, RPL5, RPL7A, RPL8, RPLP1, RPS12, RPS13, RPS14, RPS15, RPS15A, RPS19, RPS23, RPS27A, RPS3, RPS4X, RPS5, RPS7, RPS8, RPS9
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| ZZZ3 | 7.91479601155885e-19 | EEF1A1/NACA/RPL11/RPL24/RPL29/RPL3/RPL32/RPL5/RPL8/RPS14/RPS15A/RPS23/RPS3/RPS4X/RPS7 |
| RUVBL1 | 1.37266720166462e-07 | EEF1A1/NACA/RPL11/RPL18/RPL24/RPS12/RPS14 |
| PSMB5 | 1.37266720166462e-07 | EEF1A1/RPL10/RPL12/RPL3/RPL32/RPLP1/RPS12/RPS9 |
| NPM1 | 8.44610226544066e-06 | RPL10/RPL12/RPL18/RPL7A/RPS19/RPS7/RPS8 |
| GTF2E2 | 1.69180553701949e-05 | EEF1A1/RPL10/RPL12/RPLP1/RPS12/RPS8/RPS9 |
| HJURP | 2.71150205332253e-05 | EEF1A1/RPL3/RPL7A/RPS15A |
| FOXR2 | 0.00017734117507332 | EEF1A1/RPL32/RPL8/RPS14/RPS5 |
| PER1 | 0.00017734117507332 | EEF1A1/RPL12/RPL3 |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_1_1 | GO:0031396 | regulation of protein ubiquitination | 4/33 | 205/18986 | 0.00042257662922864 | 0.00505634794283934 | 0.00397268047078838 | RPL11/RPL5/RPS3/RPS7 | 4 |
| GO | B_1_1 | GO:0003746 | translation elongation factor activity | 2/33 | 18/18737 | 0.00045218347097693 | 0.00381126068394846 | 0.00265190306287226 | EEF1A1/EEF1B2 | 2 |
| MeSH_gene2pubmed | B_1_1 | D005095 | Exoribonucleases | 4/33 | 287/26076 | 0.00045726032003159 | 0.00545328739013909 | 0.00403918444964366 | EEF1A1/RPL24/RPL5/RPS15 | 4 |
| MeSH_gene2pubmed | B_1_1 | D018087 | Plastids | 2/33 | 25/26076 | 0.00045751531554617 | 0.00545328739013909 | 0.00403918444964366 | RPL14/RPS7 | 2 |
| GO | B_1_1 | GO:2000434 | regulation of protein neddylation | 2/33 | 20/18986 | 0.00054584034890728 | 0.00631355336902758 | 0.00496044387252584 | RPL11/RPL5 | 2 |
| MeSH_gene2pubmed | B_1_1 | D000232 | Adenofibroma | 2/33 | 30/26076 | 0.00066077691061362 | 0.00762990838974171 | 0.00565138147235338 | RPL13/RPS27A | 2 |
| MeSH_gene2pubmed | B_1_1 | D018745 | Genome, Plant | 2/33 | 30/26076 | 0.00066077691061362 | 0.00762990838974171 | 0.00565138147235338 | RPS14/RPS19 | 2 |
| reactome | B_1_1 | R-HSA-6790901 | rRNA modification in the nucleus and cytosol | 3/32 | 61/11146 | 0.0006909470322908 | 0.00707311567266109 | 0.0059333401664861 | RPS14/RPS7/RPS9 | 3 |
| MeSH_gene2pubmed | B_1_1 | D001411 | Geobacillus stearothermophilus | 2/33 | 31/26076 | 0.00070578897907673 | 0.00802427777750313 | 0.00594348613959352 | RPL14/RPS19 | 2 |
| MeSH_gene2pubmed | B_1_1 | D000814 | Aniline Compounds | 3/33 | 140/26076 | 0.00073443477746436 | 0.00822344394766921 | 0.00609100612889109 | RPL11/RPS13/RPS19 | 3 |