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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_14_24 | D054875 | Ubiquitination | 6/31 | 479/26076 | 1.8563406442057e-05 | 0.00086094068796134 | 0.00055875061211084 | DHFR/GMNN/H2AC20/MAD2L1/SKP2/UBE2T | 6 |
| KEGG | B_14_24 | hsa03430 | Mismatch repair | 3/20 | 23/8541 | 1.88764927841551e-05 | 0.00024539440619401 | 0.00020532325484519 | POLD3/RFC3/RFC4 | 3 |
| reactome | B_14_24 | R-HSA-5696397 | Gap-filling DNA repair synthesis and ligation in GG-NER | 3/24 | 25/11146 | 1.95586272742604e-05 | 0.00018541578655998 | 0.00010129310125195 | POLD3/RFC3/RFC4 | 3 |
| MeSH_gene2pubmed | B_14_24 | D018816 | Genes, cdc | 5/31 | 287/26076 | 2.09621025766806e-05 | 0.00094660442162063 | 0.00061434638576532 | DHFR/GMNN/MAD2L1/RRM1/TOPBP1 | 5 |
| WikiPathways | B_14_24 | WP531 | DNA mismatch repair | 3/22 | 23/8836 | 2.29746677089369e-05 | 0.00024697767787107 | 0.00011487333854468 | POLD3/RFC3/RFC4 | 3 |
| MeSH_gene2pubmed | B_14_24 | D051358 | Cyclin-Dependent Kinase 4 | 5/31 | 293/26076 | 2.31475500774318e-05 | 0.001018492203407 | 0.00066100156496417 | CHAF1A/DHFR/PRIM1/SKP2/YEATS4 | 5 |
| MeSH_gene2pubmed | B_14_24 | D043224 | Deoxyribonuclease (Pyrimidine Dimer) | 3/31 | 47/26076 | 2.38086907618956e-05 | 0.00102139283368532 | 0.00066288407437067 | DHFR/FEN1/UNG | 3 |
| GO | B_14_24 | GO:0000228 | nuclear chromosome | 5/30 | 236/19960 | 2.4793974005627e-05 | 0.00049494095882774 | 0.00027289977679725 | MMS22L/ORC6/POLD3/PRIM1/TOPBP1 | 5 |
| GO | B_14_24 | GO:0098687 | chromosomal region | 6/30 | 404/19960 | 2.60627371504749e-05 | 0.00049494095882774 | 0.00027289977679725 | CENPK/CKAP5/FEN1/HELLS/MAD2L1/MIS18A | 6 |
| reactome | B_14_24 | R-HSA-5693532 | DNA Double-Strand Break Repair | 5/24 | 170/11146 | 2.6150867062667e-05 | 0.000238375211302 | 0.00013022496553473 | FEN1/POLD3/RFC3/RFC4/TOPBP1 | 5 |