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Selected Module: B_14_24


Module Info

Module_Name B_14_24
Cell_Type B
Name B_14_24: DNA-templated DNA replication
Meta_Module B_9
Gene_Number 31

Genes:

ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4


UMAP Visualizations


UMAP for B_14_24

UMAP for B_14_24


Word Cloud

Enriched TF

Wordcloud for B_14_24
TF p.adjust Genes
SGCGSSAAA 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
KTGGYRSGAA 8.60315355022546e-05 MMS22L/PRIM1/RFC4/TOPBP1
E2F1DP1RB 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F1 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F1DP1 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_14_24 R-HSA-69206 G1/S Transition 5/24 131/11146 7.37981499838139e-06 8.32864835531614e-05 4.54996112682161e-05 DHFR/GMNN/ORC6/PRIM1/SKP2 5
MeSH_gene2pubmed B_14_24 D000705 Anaphase 5/31 232/26076 7.51167358694117e-06 0.00049577045673811 0.0003217550872463 DHFR/GMNN/MAD2L1/TOPBP1/TTF2 5
MeSH_gene2pubmed B_14_24 D004706 D004706 5/31 240/26076 8.85300699434756e-06 0.00056265777786297 0.00036516496686236 CHAF1A/DHFR/FEN1/TOPBP1/UNG 5
WikiPathways B_14_24 WP4946 DNA repair pathways full network 5/22 121/8836 9.68713618624422e-06 0.00013884895200283 6.45809079082948e-05 FEN1/POLD3/RFC3/RFC4/UNG 5
GO B_14_24 GO:0006302 double-strand break repair 6/30 323/18986 9.73778915167379e-06 0.00060753449958113 0.0003945364110183 DDX11/FEN1/MMS22L/SKP2/TOPBP1/YEATS4 6
MeSH_gene2pubmed B_14_24 D019926 Cyclin B 6/31 428/26076 9.81778884367956e-06 0.00060169020199121 0.00039049701491026 CHAF1A/CKAP5/GMNN/LMNB1/MAD2L1/SKP2 6
reactome B_14_24 R-HSA-5693538 Homology Directed Repair 5/24 140/11146 1.02076211149151e-05 0.00010996391837431 6.00735596715098e-05 FEN1/POLD3/RFC3/RFC4/TOPBP1 5
GO B_14_24 GO:0000724 double-strand break repair via homologous recombination 5/30 188/18986 1.05199192536727e-05 0.00060753449958113 0.0003945364110183 FEN1/MMS22L/SKP2/TOPBP1/YEATS4 5
GO B_14_24 GO:0045814 negative regulation of gene expression, epigenetic 5/30 192/18986 1.16494667509363e-05 0.00060753449958113 0.0003945364110183 H2AC20/HELLS/LMNB1/MIS18A/PHF19 5
MeSH_gene2pubmed B_14_24 D006918 Hydroxyurea 5/31 255/26076 1.18682285489112e-05 0.00065667869317006 0.00042618455243156 CHAF1A/DHFR/MAD2L1/RFC4/RRM1 5