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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_14_24 | R-HSA-69190 | DNA strand elongation | 5/24 | 32/11146 | 5.75080864623135e-09 | 2.27156941526138e-07 | 1.24096397102887e-07 | FEN1/POLD3/PRIM1/RFC3/RFC4 | 5 |
| reactome | B_14_24 | R-HSA-174417 | Telomere C-strand (Lagging Strand) Synthesis | 5/24 | 34/11146 | 7.92372186398899e-09 | 2.68274583109341e-07 | 1.46559066055736e-07 | FEN1/POLD3/PRIM1/RFC3/RFC4 | 5 |
| MeSH_gene2pubmed | B_14_24 | D002842 | Chromatids | 6/31 | 139/26076 | 1.35797397003826e-08 | 2.33028333258565e-06 | 1.51235416873734e-06 | DDX11/DHFR/FEN1/MAD2L1/RFC3/RFC4 | 6 |
| KEGG | B_14_24 | hsa03030 | DNA replication | 5/20 | 36/8541 | 1.47630179863366e-08 | 5.75757701467126e-07 | 4.81740586922562e-07 | FEN1/POLD3/PRIM1/RFC3/RFC4 | 5 |
| reactome | B_14_24 | R-HSA-73933 | Resolution of Abasic Sites (AP sites) | 5/24 | 39/11146 | 1.6279168539887e-08 | 3.86615917859597e-07 | 2.11209228943951e-07 | FEN1/POLD3/RFC3/RFC4/UNG | 5 |
| reactome | B_14_24 | R-HSA-69091 | Polymerase switching | 4/24 | 14/11146 | 1.63129079265653e-08 | 3.86615917859597e-07 | 2.11209228943951e-07 | POLD3/PRIM1/RFC3/RFC4 | 4 |
| reactome | B_14_24 | R-HSA-69109 | Leading Strand Synthesis | 4/24 | 14/11146 | 1.63129079265653e-08 | 3.86615917859597e-07 | 2.11209228943951e-07 | POLD3/PRIM1/RFC3/RFC4 | 4 |
| MeSH_gene2pubmed | B_14_24 | D051738 | Origin Recognition Complex | 5/31 | 68/26076 | 1.67359362311316e-08 | 2.61080605205654e-06 | 1.69441344808969e-06 | CHAF1A/DHFR/GMNN/ORC6/SKP2 | 5 |
| MeSH_gene2pubmed | B_14_24 | D019925 | Cyclin A | 8/31 | 415/26076 | 2.20331302637019e-08 | 3.15073762770937e-06 | 2.04482910692953e-06 | CHAF1A/FEN1/GMNN/MAD2L1/ORC6/POLD3/RFC4/SKP2 | 8 |
| reactome | B_14_24 | R-HSA-73884 | Base Excision Repair | 6/24 | 91/11146 | 2.9978423052381e-08 | 6.45898751219482e-07 | 3.52856079946686e-07 | FEN1/H2AC20/POLD3/RFC3/RFC4/UNG | 6 |