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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_14_24 | GO:0031297 | replication fork processing | 2/30 | 51/18986 | 0.00293286923008814 | 0.0309511305983769 | 0.020099842875856 | DDX11/MMS22L | 2 |
| MeSH_gene2pubmed | B_14_24 | D004248 | DNA (Cytosine-5-)-Methyltransferases | 3/31 | 244/26076 | 0.00299764595090455 | 0.0401871910293141 | 0.0260814919083636 | DHFR/HELLS/UNG | 3 |
| MeSH_gene2pubmed | B_14_24 | D016685 | Mitomycin | 3/31 | 244/26076 | 0.00299764595090455 | 0.0401871910293141 | 0.0260814919083636 | DHFR/MAD2L1/UBE2T | 3 |
| MeSH_gene2pubmed | B_14_24 | D012004 | Rectal Neoplasms | 3/31 | 245/26076 | 0.00303237725452518 | 0.0403376695253117 | 0.0261791524707274 | GMNN/SKP2/UNG | 3 |
| GO | B_14_24 | GO:2000573 | positive regulation of DNA biosynthetic process | 2/30 | 53/18986 | 0.00316359457968782 | 0.0326904773234408 | 0.021229384679484 | RFC3/RFC4 | 2 |
| WikiPathways | B_14_24 | WP1601 | Fluoropyrimidine activity | 2/22 | 34/8836 | 0.00316362760071463 | 0.0123669078937027 | 0.00575205018311751 | DHFR/RRM1 | 2 |
| MeSH_gene2pubmed | B_14_24 | D000105 | Acetyl Coenzyme A | 2/31 | 71/26076 | 0.00322972247681827 | 0.0426323366940011 | 0.0276683917447265 | CHAF1A/DHFR | 2 |
| reactome | B_14_24 | R-HSA-5663220 | RHO GTPases Activate Formins | 3/24 | 140/11146 | 0.00323577594075542 | 0.0108011112388597 | 0.00590067369478009 | CENPK/CKAP5/MAD2L1 | 3 |
| reactome | B_14_24 | R-HSA-68867 | Assembly of the pre-replicative complex | 3/24 | 141/11146 | 0.00330146270471359 | 0.0108673147363489 | 0.00593684082865163 | GMNN/H2AC20/ORC6 | 3 |
| GO | B_14_24 | GO:0140030 | modification-dependent protein binding | 3/30 | 188/18737 | 0.00330646982141954 | 0.0486523416580303 | 0.0323188779537248 | PHF19/TOPBP1/YEATS4 | 3 |