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Selected Module: B_14_24


Module Info

Module_Name B_14_24
Cell_Type B
Name B_14_24: DNA-templated DNA replication
Meta_Module B_9
Gene_Number 31

Genes:

ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4


UMAP Visualizations


UMAP for B_14_24

UMAP for B_14_24


Word Cloud

Enriched TF

Wordcloud for B_14_24
TF p.adjust Genes
SGCGSSAAA 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
KTGGYRSGAA 8.60315355022546e-05 MMS22L/PRIM1/RFC4/TOPBP1
E2F1DP1RB 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F1 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG
E2F1DP1 8.60315355022546e-05 ATAD5/GMNN/POLD3/TOPBP1/UNG


Functional Enrichment Results

enrichment_term
module ID Description GeneRatio BgRatio pvalue p.adjust qvalue geneID Count
reactome B_14_24 R-HSA-73886 Chromosome Maintenance 8/24 140/11146 3.14569282695865e-10 2.48509733329733e-08 1.35761479900321e-08 CENPK/FEN1/H2AC20/MIS18A/POLD3/PRIM1/RFC3/RFC4 8
MeSH_gene2pubmed B_14_24 D004257 DNA Polymerase II 7/31 151/26076 4.44250634460875e-10 1.2705568145581e-07 8.24591528525625e-08 DHFR/FEN1/POLD3/PRIM1/RFC3/RFC4/TOPBP1 7
reactome B_14_24 R-HSA-69186 Lagging Strand Synthesis 5/24 20/11146 4.50383254997816e-10 2.66852078586206e-08 1.45781948328241e-08 FEN1/POLD3/PRIM1/RFC3/RFC4 5
WikiPathways B_14_24 WP466 DNA replication 6/22 42/8836 5.60829287964802e-10 2.41156593824865e-08 1.1216585759296e-08 GMNN/ORC6/POLD3/PRIM1/RFC3/RFC4 6
MeSH_gene2pubmed B_14_24 D004259 DNA-Directed DNA Polymerase 8/31 270/26076 7.64598967198958e-10 1.8743597538763e-07 1.2164597102203e-07 DHFR/FEN1/MAD2L1/POLD3/PRIM1/RFC3/RFC4/UNG 8
reactome B_14_24 R-HSA-69242 S Phase 8/24 162/11146 1.01086827723071e-09 4.79151563407356e-08 2.61761680209215e-08 FEN1/GMNN/ORC6/POLD3/PRIM1/RFC3/RFC4/SKP2 8
WikiPathways B_14_24 WP2446 Retinoblastoma gene in cancer 7/22 89/8836 1.24910934684427e-09 2.68558509571518e-08 1.24910934684427e-08 DHFR/POLD3/PRIM1/RFC3/RFC4/RRM1/SKP2 7
hallmark B_14_24 HALLMARK_E2F_TARGETS HALLMARK_E2F_TARGETS 10/19 200/4384 2.01804721175155e-09 2.01804721175155e-08 1.48698215602745e-08 CSE1L/HELLS/LMNB1/MAD2L1/MMS22L/ORC6/POLD3/RFC3/UBE2T/UNG 10
MeSH_gene2pubmed B_14_24 D005092 Exonucleases 7/31 199/26076 3.05385842962878e-09 6.55052633155374e-07 4.25129239282533e-07 FEN1/PRIM1/RFC3/RFC4/RRM1/TOPBP1/UNG 7
MeSH_gene2pubmed B_14_24 D004258 DNA Polymerase III 6/31 116/26076 4.57308780338575e-09 8.71935407845549e-07 5.65886186664576e-07 CHAF1A/FEN1/POLD3/PRIM1/RFC3/RFC4 6