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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_14_24 | R-HSA-774815 | Nucleosome assembly | 3/24 | 73/11146 | 0.00049421895018482 | 0.00249212534454901 | 0.00136145421887421 | CENPK/H2AC20/MIS18A | 3 |
| GO | B_14_24 | GO:0043601 | nuclear replisome | 2/30 | 22/19960 | 0.0004951199000718 | 0.00346583930050261 | 0.00191098908799643 | POLD3/PRIM1 | 2 |
| MeSH_gene2pubmed | B_14_24 | D049468 | Prometaphase | 2/31 | 28/26076 | 0.00050715480735861 | 0.0124325378489626 | 0.00806871858925436 | DDX11/MAD2L1 | 2 |
| reactome | B_14_24 | R-HSA-110312 | Translesion synthesis by REV1 | 2/24 | 16/11146 | 0.00052350274151896 | 0.00258479478624988 | 0.00141207976330773 | RFC3/RFC4 | 2 |
| GO | B_14_24 | GO:0065004 | protein-DNA complex assembly | 4/30 | 242/18986 | 0.00054374336056448 | 0.00898989022799946 | 0.00583808660816603 | CENPK/CHAF1A/GMNN/MIS18A | 4 |
| reactome | B_14_24 | R-HSA-6781827 | Transcription-Coupled Nucleotide Excision Repair (TC-NER) | 3/24 | 77/11146 | 0.0005779874837778 | 0.00270053902303776 | 0.00147531112517719 | POLD3/RFC3/RFC4 | 3 |
| MeSH_gene2pubmed | B_14_24 | D017017 | D017017 | 2/31 | 30/26076 | 0.00058276682717058 | 0.0140848996538694 | 0.00914110160335779 | DHFR/FEN1 | 2 |
| GO | B_14_24 | GO:0030894 | replisome | 2/30 | 24/19960 | 0.00059046756458146 | 0.00371994565686321 | 0.00205109785591455 | POLD3/PRIM1 | 2 |
| reactome | B_14_24 | R-HSA-174437 | Removal of the Flap Intermediate from the C-strand | 2/24 | 17/11146 | 0.00059252332994921 | 0.00270053902303776 | 0.00147531112517719 | FEN1/POLD3 | 2 |
| reactome | B_14_24 | R-HSA-5655862 | Translesion synthesis by POLK | 2/24 | 17/11146 | 0.00059252332994921 | 0.00270053902303776 | 0.00147531112517719 | RFC3/RFC4 | 2 |