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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| hallmark | B_14_24 | HALLMARK_DNA_REPAIR | HALLMARK_DNA_REPAIR | 5/19 | 150/4384 | 0.00034588826690798 | 0.00172944133453992 | 0.00127432519387152 | FEN1/POLD3/PRIM1/RFC3/RFC4 | 5 |
| GO | B_14_24 | GO:0071103 | DNA conformation change | 3/30 | 91/18986 | 0.00039375917774771 | 0.00697516257724524 | 0.00452971084175943 | DDX11/RFC3/RFC4 | 3 |
| KEGG | B_14_24 | hsa03420 | Nucleotide excision repair | 3/20 | 63/8541 | 0.00039871265614968 | 0.00338112569744412 | 0.00282901205454164 | POLD3/RFC3/RFC4 | 3 |
| GO | B_14_24 | GO:0042575 | DNA polymerase complex | 2/30 | 20/19960 | 0.00040800320225752 | 0.00344077644462726 | 0.00189716996946867 | POLD3/PRIM1 | 2 |
| reactome | B_14_24 | R-HSA-69481 | G2/M Checkpoints | 4/24 | 167/11146 | 0.0004087360725166 | 0.00215267664858744 | 0.00117601255952145 | ORC6/RFC3/RFC4/TOPBP1 | 4 |
| GO | B_14_24 | GO:2000781 | positive regulation of double-strand break repair | 3/30 | 94/18986 | 0.00043308045006714 | 0.00740716907701044 | 0.00481025835646264 | DDX11/SKP2/YEATS4 | 3 |
| KEGG | B_14_24 | hsa04110 | Cell cycle | 4/20 | 158/8541 | 0.00043347765351847 | 0.00338112569744412 | 0.00282901205454164 | DDX11/MAD2L1/ORC6/SKP2 | 4 |
| GO | B_14_24 | GO:0032993 | protein-DNA complex | 4/30 | 240/19960 | 0.00043692399296854 | 0.00344077644462726 | 0.00189716996946867 | H2AC20/POLD3/PRIM1/YEATS4 | 4 |
| MeSH_gene2pubmed | B_14_24 | D009153 | Mutagens | 4/31 | 312/26076 | 0.0004902248891773 | 0.0121916798525833 | 0.00791240172005468 | CHAF1A/DHFR/FEN1/UNG | 4 |
| reactome | B_14_24 | R-HSA-606279 | Deposition of new CENPA-containing nucleosomes at the centromere | 3/24 | 73/11146 | 0.00049421895018482 | 0.00249212534454901 | 0.00136145421887421 | CENPK/H2AC20/MIS18A | 3 |