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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_14_24 | GO:0003678 | DNA helicase activity | 3/30 | 59/18737 | 0.00011333633718984 | 0.00291841068263859 | 0.00193864787298425 | DDX11/RFC3/RFC4 | 3 |
| MeSH_gene2pubmed | B_14_24 | D013539 | Simian virus 40 | 5/31 | 410/26076 | 0.00011376009090593 | 0.00354931483626529 | 0.0023035057641815 | CHAF1A/DHFR/PRIM1/RFC3/RFC4 | 5 |
| GO | B_14_24 | GO:0031507 | heterochromatin formation | 4/30 | 161/18986 | 0.00011494590986255 | 0.00271491291865842 | 0.00176308012120008 | H2AC20/HELLS/LMNB1/MIS18A | 4 |
| MeSH_gene2pubmed | B_14_24 | D003078 | Colchicine | 4/31 | 217/26076 | 0.00012305141191842 | 0.00377064683664319 | 0.00244715025958073 | CKAP5/CSE1L/DHFR/MAD2L1 | 4 |
| reactome | B_14_24 | R-HSA-73893 | DNA Damage Bypass | 3/24 | 48/11146 | 0.00014237659891045 | 0.00086521163953273 | 0.0004726672514436 | POLD3/RFC3/RFC4 | 3 |
| GO | B_14_24 | GO:0000922 | spindle pole | 4/30 | 180/19960 | 0.00014593025774674 | 0.00153226770634078 | 0.00084485938695481 | CKAP5/DDX11/MAD2L1/TOPBP1 | 4 |
| MeSH_gene2pubmed | B_14_24 | D016086 | Lentivirus | 5/31 | 437/26076 | 0.00015323430897201 | 0.00461315919642064 | 0.00299394088443935 | DHFR/FEN1/GMNN/SKP2/UNG | 5 |
| GO | B_14_24 | GO:0071897 | DNA biosynthetic process | 4/30 | 175/18986 | 0.00015848666722896 | 0.00357315395207129 | 0.00232042680249112 | POLD3/RFC3/RFC4/RRM1 | 4 |
| WikiPathways | B_14_24 | WP4753 | Nucleotide excision repair | 3/22 | 44/8836 | 0.00016608589027146 | 0.00102024189738187 | 0.00047453111506133 | POLD3/RFC3/RFC4 | 3 |
| reactome | B_14_24 | R-HSA-9675135 | Diseases of DNA repair | 3/24 | 51/11146 | 0.00017070141124556 | 0.00101140586162998 | 0.00055253351534749 | RFC3/RFC4/TOPBP1 | 3 |