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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| MeSH_gene2pubmed | B_14_24 | D011120 | Polyomavirus | 3/31 | 63/26076 | 5.75621746091069e-05 | 0.00197553383258455 | 0.00128212169971442 | DHFR/LMNB1/PRIM1 | 3 |
| WikiPathways | B_14_24 | WP2363 | Gastric cancer network 2 | 3/22 | 31/8836 | 5.75642901307944e-05 | 0.00041254407927069 | 0.00019188096710264 | RFC3/RFC4/UBE2T | 3 |
| WikiPathways | B_14_24 | WP4752 | Base excision repair | 3/22 | 31/8836 | 5.75642901307944e-05 | 0.00041254407927069 | 0.00019188096710264 | FEN1/POLD3/UNG | 3 |
| GO | B_14_24 | GO:0090068 | positive regulation of cell cycle process | 5/30 | 274/18986 | 6.40018823319191e-05 | 0.00193625815927747 | 0.00125741722567679 | ATAD5/DDX11/FEN1/MAD2L1/RRM1 | 5 |
| reactome | B_14_24 | R-HSA-176187 | Activation of ATR in response to replication stress | 3/24 | 37/11146 | 6.49628191168427e-05 | 0.00048113087908411 | 0.00026284298524248 | ORC6/RFC3/RFC4 | 3 |
| reactome | B_14_24 | R-HSA-5685938 | HDR through Single Strand Annealing (SSA) | 3/24 | 37/11146 | 6.49628191168427e-05 | 0.00048113087908411 | 0.00026284298524248 | RFC3/RFC4/TOPBP1 | 3 |
| GO | B_14_24 | GO:0090329 | regulation of DNA-templated DNA replication | 3/30 | 50/18986 | 6.63636869107196e-05 | 0.00193625815927747 | 0.00125741722567679 | GMNN/RFC3/RFC4 | 3 |
| reactome | B_14_24 | R-HSA-110313 | Translesion synthesis by Y family DNA polymerases bypasses lesions on DNA template | 3/24 | 39/11146 | 7.61929779718602e-05 | 0.00054720411452517 | 0.000298938956636 | POLD3/RFC3/RFC4 | 3 |
| MeSH_gene2pubmed | B_14_24 | D008080 | Liposarcoma | 3/31 | 70/26076 | 7.89014988075643e-05 | 0.00260374946064962 | 0.00168983371940087 | DHFR/MAD2L1/YEATS4 | 3 |
| MeSH_gene2pubmed | B_14_24 | D013692 | Telophase | 3/31 | 70/26076 | 7.89014988075643e-05 | 0.00260374946064962 | 0.00168983371940087 | DHFR/GMNN/MIS18A | 3 |