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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| reactome | B_14_24 | R-HSA-5656169 | Termination of translesion DNA synthesis | 3/24 | 32/11146 | 4.17632911995679e-05 | 0.00035349642908205 | 0.00019311597058446 | POLD3/RFC3/RFC4 | 3 |
| MeSH_gene2pubmed | B_14_24 | D045585 | Flap Endonucleases | 3/31 | 57/26076 | 4.26184363839481e-05 | 0.00157875396104508 | 0.00102461151440663 | DDX11/FEN1/POLD3 | 3 |
| MeSH_gene2pubmed | B_14_24 | D019927 | D019927 | 5/31 | 334/26076 | 4.32409301684841e-05 | 0.00157875396104508 | 0.00102461151440663 | CHAF1A/GMNN/MAD2L1/SKP2/TOPBP1 | 5 |
| MeSH_gene2pubmed | B_14_24 | D051135 | Rad51 Recombinase | 4/31 | 167/26076 | 4.46127412896725e-05 | 0.00159490550110579 | 0.00103509386588758 | FEN1/GMNN/MAD2L1/TOPBP1 | 4 |
| GO | B_14_24 | GO:0006275 | regulation of DNA replication | 4/30 | 127/18986 | 4.57279431049502e-05 | 0.00171129580071588 | 0.00111132537143264 | ATAD5/GMNN/RFC3/RFC4 | 4 |
| reactome | B_14_24 | R-HSA-68962 | Activation of the pre-replicative complex | 3/24 | 33/11146 | 4.58747312153369e-05 | 0.00037490728613913 | 0.00020481277457301 | GMNN/ORC6/PRIM1 | 3 |
| GO | B_14_24 | GO:0044786 | cell cycle DNA replication | 3/30 | 45/18986 | 4.83027040524644e-05 | 0.00171129580071588 | 0.00111132537143264 | ATAD5/FEN1/GMNN | 3 |
| MeSH_gene2pubmed | B_14_24 | D004270 | DNA, Circular | 4/31 | 174/26076 | 5.23489812063254e-05 | 0.00183328268877662 | 0.00118980068993109 | FEN1/RFC3/RFC4/TOPBP1 | 4 |
| reactome | B_14_24 | R-HSA-9709570 | Impaired BRCA2 binding to RAD51 | 3/24 | 35/11146 | 5.48758333838538e-05 | 0.00043351908373244 | 0.00023683254407768 | RFC3/RFC4/TOPBP1 | 3 |
| GO | B_14_24 | GO:0000731 | DNA synthesis involved in DNA repair | 3/30 | 47/18986 | 5.50782475491718e-05 | 0.00182125405229261 | 0.00118273289474011 | POLD3/RFC3/RRM1 | 3 |