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Selected Module: B_14_24
Module Info
| Module_Name | B_14_24 |
| Cell_Type | B |
| Name | B_14_24: DNA-templated DNA replication |
| Meta_Module | B_9 |
| Gene_Number | 31 |
Genes:
ATAD5, CENPK, CHAF1A, CKAP5, CSE1L, DDX11, DHFR, FEN1, FN3KRP, GMNN, H2AC20, HELLS, LMNB1, MAD2L1, MIS18A, MMS22L, ORC6, PHF19, POLD3, PRIM1, RFC3, RFC4, RRM1, SAAL1, SKP2, TEX30, TOPBP1, TTF2, UBE2T, UNG, YEATS4
UMAP Visualizations
Word Cloud
Enriched TF
| TF | p.adjust | Genes |
|---|---|---|
| SGCGSSAAA | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| KTGGYRSGAA | 8.60315355022546e-05 | MMS22L/PRIM1/RFC4/TOPBP1 |
| E2F1DP1RB | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
| E2F1DP1 | 8.60315355022546e-05 | ATAD5/GMNN/POLD3/TOPBP1/UNG |
Functional Enrichment Results
|
enrichment_term
|
module | ID | Description | GeneRatio | BgRatio | pvalue | p.adjust | qvalue | geneID | Count |
|---|---|---|---|---|---|---|---|---|---|---|
| GO | B_14_24 | GO:0022616 | DNA strand elongation | 3/30 | 37/18986 | 2.66755988477723e-05 | 0.00120282700259046 | 0.00078112279879601 | POLD3/RFC3/RFC4 | 3 |
| MeSH_gene2pubmed | B_14_24 | D043211 | Exodeoxyribonuclease V | 3/31 | 49/26076 | 2.70086791247527e-05 | 0.00110705855592806 | 0.00071848113861605 | FEN1/POLD3/PRIM1 | 3 |
| MeSH_gene2pubmed | B_14_24 | D008741 | Methyl Methanesulfonate | 4/31 | 147/26076 | 2.70958387814559e-05 | 0.00110705855592806 | 0.00071848113861605 | CHAF1A/DHFR/FEN1/UNG | 4 |
| GO | B_14_24 | GO:0043596 | nuclear replication fork | 3/30 | 41/19960 | 3.1424822782714e-05 | 0.00049494095882774 | 0.00027289977679725 | MMS22L/POLD3/PRIM1 | 3 |
| reactome | B_14_24 | R-HSA-110314 | Recognition of DNA damage by PCNA-containing replication complex | 3/24 | 30/11146 | 3.4282055645805e-05 | 0.00030092026622428 | 0.0001643934832138 | POLD3/RFC3/RFC4 | 3 |
| GO | B_14_24 | GO:0033260 | nuclear DNA replication | 3/30 | 41/18986 | 3.64416637605478e-05 | 0.00150625543543597 | 0.00097817097462523 | ATAD5/FEN1/GMNN | 3 |
| MeSH_gene2pubmed | B_14_24 | D045643 | DNA Repair Enzymes | 5/31 | 325/26076 | 3.79729514252388e-05 | 0.00151538568943511 | 0.00098348549835746 | FEN1/RFC3/TOPBP1/TTF2/UNG | 5 |
| MeSH_gene2pubmed | B_14_24 | D017104 | Bacteriophage M13 | 3/31 | 56/26076 | 4.04078660313032e-05 | 0.00154774293239659 | 0.00100448535300919 | FEN1/POLD3/UNG | 3 |
| MeSH_gene2pubmed | B_14_24 | D009692 | Nucleic Acid Heteroduplexes | 4/31 | 163/26076 | 4.05876643110993e-05 | 0.00154774293239659 | 0.00100448535300919 | DHFR/POLD3/RFC3/RFC4 | 4 |
| GO | B_14_24 | GO:0000775 | chromosome, centromeric region | 5/30 | 262/19960 | 4.08612872518393e-05 | 0.00051485221937317 | 0.00028387841669698 | CENPK/CKAP5/HELLS/MAD2L1/MIS18A | 5 |